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UROTHELIAL CANCER - Interactive survival scatter ploti
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The interactive Survival Scatter plot allows for the cutoff to be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Survival analysis". Under the Survival Scatter plot the p-score landscape is shown together with the difference in median between survival time for patients who have died with respect to high and low expression. This is intended to aid the user in exploring custom cutoffs.
Individual patient data is displayed in an interactive plot and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off).
LGALS1 is prognostic, high expression is unfavourable in urothelial cancer
Stage:
Survival analysis
Current cut off: Best expression cut offi
Based on the FPKM value of each gene, we classified the patients into two groups and examined their prognoses. In the analysis, we excluded genes with low expression, i.e., those with a median expression among samples less than FPKM 1. The prognosis of each group of patients was examined by Kaplan-Meier survival estimators, and the survival outcomes of the two groups were compared by log-rank tests. To choose the best FPKM cut-offs for grouping the patients most significantly, all FPKM values from the 20th to 80th percentiles were used to group the patients, significant differences in the survival outcomes of the groups were examined and the value yielding the lowest log-rank P value is selected.
: 219.58
Median expression: N/A
Median follow up time: N/A P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A 5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A 5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as median FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average FPKM
289.2
Number of samples
406
Samples
Sample
Description
FPKM
TCGA-FJ-A871-01A
49 years, male, white, stage:iii, dead, 272 days
3558.8
TCGA-G2-AA3C-01A
66 years, male, white, stage:iv, dead, 211 days
2711.5
TCGA-FD-A5BX-01A
82 years, male, white, stage:iv, dead, 173 days
1880.1
TCGA-DK-AA74-01A
75 years, male, white, stage:iii, alive, 1708 days
1602.7
TCGA-FD-A5BT-01A
84 years, male, white, stage:iii, dead, 328 days
1389.9
TCGA-E7-A7DV-01A
44 years, male, white, stage:iv, alive, 37 days
1309.5
TCGA-ZF-AA54-01A
71 years, male, white, stage:iii, dead, 590 days
1307.1
TCGA-ZF-AA53-01A
60 years, male, white, stage:ii, alive, 1761 days
1252.3
TCGA-XF-AAMW-01A
79 years, female, white, stage:iv, dead, 253 days
1215.0
TCGA-BL-A5ZZ-01A
80 years, female, white, stage:iii, alive, 377 days
1208.2
TCGA-XF-AAN7-01A
60 years, male, white, stage:iv, dead, 565 days
1145.5
TCGA-UY-A8OC-01A
90 years, male, white, stage:iv, dead, 92 days
1094.8
TCGA-DK-A3IQ-01A
74 years, male, white, stage:iii, dead, 539 days
1027.8
TCGA-FD-A43U-01A
70 years, male, white, stage:iv, alive, 636 days
975.9
TCGA-FD-A6TK-01A
60 years, male, white, stage:iii, alive, 330 days
952.9
TCGA-ZF-AA58-01A
61 years, female, white, stage:iv, alive, 1649 days
934.9
TCGA-XF-AAN8-01A
74 years, female, white, stage:iii, dead, 118 days
879.6
TCGA-GD-A6C6-01A
64 years, male, white, stage:iii, alive, 67 days
849.3
TCGA-C4-A0F0-01A
60 years, male, stage:ii, alive, 59 days
846.6
TCGA-DK-A2I6-01A
81 years, male, white, stage:iv, alive, 2656 days
827.1
TCGA-K4-A5RH-01A
69 years, male, white, stage:iii, alive, 276 days
825.9
TCGA-XF-AAMJ-01A
70 years, male, asian, stage:iii, dead, 1670 days
822.4
TCGA-ZF-AA5H-01A
60 years, female, white, stage:iv, alive, 897 days
803.8
TCGA-GV-A40E-01A
75 years, male, white, stage:ii, dead, 261 days
802.5
TCGA-FD-A5BS-01A
68 years, male, white, stage:iii, alive, 1639 days
797.5
TCGA-BT-A20X-01A
56 years, male, white, stage:iv, dead, 251 days
796.8
TCGA-XF-A9T4-01A
48 years, male, white, stage:iv, dead, 495 days
764.0
TCGA-XF-A9SX-01A
63 years, female, white, stage:iv, dead, 719 days
763.8
TCGA-FD-A5C1-01A
61 years, female, white, stage:iii, alive, 1792 days
763.3
TCGA-BL-A13I-01A
57 years, female, white, stage:iii, dead, 223 days
744.4
TCGA-FD-A3B7-01A
66 years, male, black or african american, stage:iii, dead, 122 days
740.0
TCGA-K4-A54R-01A
59 years, male, white, stage:ii, alive, 842 days
720.3
TCGA-ZF-AA52-01A
70 years, male, white, stage:iii, dead, 1077 days
715.3
TCGA-BT-A3PK-01A
80 years, male, white, stage:ii, dead, 303 days
708.1
TCGA-FD-A62S-01A
60 years, female, black or african american, stage:iii, dead, 406 days
700.1
TCGA-GD-A3OQ-01A
48 years, male, white, stage:iv, alive, 95 days
693.9
TCGA-FD-A3SP-01A
60 years, male, white, stage:iii, alive, 783 days
676.7
TCGA-XF-A8HD-01A
77 years, male, white, stage:iii, alive, 2964 days
673.5
TCGA-GU-A764-01A
66 years, male, white, stage:ii, alive, 610 days
650.0
TCGA-XF-A9SZ-01A
79 years, male, white, stage:iv, dead, 859 days
648.9
TCGA-ZF-AA4R-01A
67 years, male, white, stage:iv, dead, 1036 days
641.1
TCGA-UY-A78M-01A
81 years, female, asian, stage:iv, dead, 690 days
617.4
TCGA-FD-A5BZ-01A
77 years, female, white, stage:iv, dead, 835 days
615.6
TCGA-ZF-AA5N-01A
62 years, female, white, stage:iv, dead, 168 days
612.4
TCGA-XF-A9SW-01A
85 years, male, white, stage:iv, dead, 362 days
579.8
TCGA-GD-A3OS-01A
54 years, female, white, stage:ii, alive, 638 days
563.5
TCGA-UY-A8OB-01A
64 years, male, white, stage:iv, alive, 2109 days
562.7
TCGA-XF-A9SJ-01A
83 years, male, white, stage:iv, dead, 98 days
560.9
TCGA-G2-A2EO-01A
69 years, male, white, stage:iii, dead, 1804 days
556.6
TCGA-DK-AA6M-01A
64 years, female, white, stage:ii, alive, 1582 days
553.0
TCGA-XF-A9SK-01A
65 years, male, white, stage:iv, dead, 486 days
547.9
TCGA-ZF-A9RC-01A
77 years, male, white, stage:iii, alive, 2868 days
543.4
TCGA-SY-A9G5-01A
66 years, male, white, stage:iii, alive, 1186 days
538.3
TCGA-XF-AAMR-01A
48 years, male, white, stage:iii, alive, 2790 days
522.5
TCGA-4Z-AA7Y-01A
60 years, male, white, stage:ii, alive, 1522 days
520.9
TCGA-YC-A89H-01A
78 years, female, white, stage:ii, alive, 573 days
520.6
TCGA-XF-AAN4-01A
77 years, female, white, stage:iii, dead, 823 days
519.5
TCGA-4Z-AA7R-01A
73 years, male, black or african american, stage:iv, dead, 522 days
517.2
TCGA-FD-A6TD-01A
77 years, male, white, stage:iii, dead, 386 days
514.5
TCGA-GC-A3YS-01A
61 years, male, white, stage:iv, alive, 758 days
509.2
TCGA-DK-A3IN-01A
72 years, male, white, stage:iii, dead, 250 days
508.8
TCGA-4Z-AA82-01A
59 years, male, black or african american, stage:iv, dead, 1556 days
507.6
TCGA-E7-A97P-01A
73 years, male, asian, stage:ii, dead, 437 days
506.6
TCGA-4Z-AA84-01A
61 years, male, white, stage:iv, alive, 460 days
505.1
TCGA-XF-A9SL-01A
69 years, male, white, stage:iv, dead, 2020 days
504.4
TCGA-GU-A762-01A
87 years, male, white, stage:iv, dead, 232 days
501.4
TCGA-FD-A6TF-01A
80 years, female, white, stage:iv, dead, 69 days
500.7
TCGA-CF-A1HS-01A
75 years, female, asian, stage:iii, alive, 382 days
495.3
TCGA-E7-A85H-01A
64 years, male, asian, stage:iii, alive, 394 days
494.9
TCGA-GU-AATP-01A
74 years, male, white, stage:iv, alive, 1003 days
480.1
TCGA-XF-A9SY-01A
60 years, female, white, stage:iv, alive, 640 days
479.3
TCGA-FD-A3N5-01A
69 years, male, black or african american, stage:ii, dead, 685 days
474.9
TCGA-GV-A3JV-01A
66 years, male, white, stage:iv, dead, 434 days
473.3
TCGA-K4-A3WS-01A
66 years, male, white, stage:iii, alive, 761 days
460.1
TCGA-FD-A62N-01A
69 years, male, asian, stage:iii, alive, 82 days
455.5
TCGA-XF-AAME-01A
64 years, female, white, stage:ii, dead, 2828 days
452.8
TCGA-FT-A3EE-01A
80 years, female, white, stage:iii, dead, 99 days
450.4
TCGA-S5-A6DX-01A
83 years, male, white, stage:iv, dead, 56 days
448.2
TCGA-DK-A2I1-01A
73 years, female, white, stage:ii, alive, 546 days
445.4
TCGA-DK-A2I2-01A
63 years, female, white, stage:iv, dead, 237 days
437.5
TCGA-FD-A5BU-01A
76 years, female, black or african american, stage:ii, alive, 588 days
437.2
TCGA-FD-A3SQ-01A
62 years, male, white, stage:iv, dead, 1423 days
434.5
TCGA-C4-A0F1-01A
71 years, male, stage:iii, alive, 89 days
431.7
TCGA-FD-A6TC-01A
79 years, female, white, stage:iii, alive, 187 days
431.6
TCGA-XF-A9SU-01A
74 years, female, white, stage:iv, dead, 182 days
428.3
TCGA-FD-A3B6-01A
75 years, male, white, stage:ii, dead, 1005 days
427.7
TCGA-XF-A9SP-01A
59 years, male, white, stage:iii, dead, 454 days
411.3
TCGA-DK-A1A5-01A
79 years, male, white, stage:ii, dead, 65 days
411.2
TCGA-XF-AAMT-01A
75 years, female, white, stage:iv, dead, 90 days
410.2
TCGA-GC-A6I3-01A
90 years, female, black or african american, stage:iv, alive, 423 days
405.5
TCGA-UY-A9PB-01A
49 years, male, white, stage:iii, alive, 899 days
403.7
TCGA-DK-AA6S-01A
60 years, male, white, stage:iii, alive, 5050 days
402.4
TCGA-XF-A9T3-01A
69 years, female, white, stage:iv, alive, 68 days
401.2
TCGA-BT-A2LD-01A
78 years, female, white, stage:iv, dead, 623 days
401.1
TCGA-PQ-A6FN-01A
78 years, female, white, stage:iii, alive, 507 days
395.2
TCGA-YC-A8S6-01A
71 years, male, white, stage:ii, alive, 293 days
395.1
TCGA-BT-A20O-01A
75 years, male, white, stage:iii, dead, 370 days
392.7
TCGA-FD-A43Y-01A
65 years, male, white, stage:iii, dead, 474 days
392.3
TCGA-ZF-AA4V-01A
66 years, male, white, stage:iii, alive, 1806 days
391.4
TCGA-DK-A1AB-01A
74 years, female, white, stage:iv, dead, 508 days
389.6
TCGA-DK-A1AF-01A
84 years, female, white, stage:iv, alive, 536 days
387.3
TCGA-ZF-AA5P-01A
65 years, male, white, stage:iv, alive, 372 days
387.1
TCGA-ZF-AA4N-01A
74 years, male, white, stage:ii, dead, 88 days
386.9
TCGA-FD-A3SM-01A
70 years, male, white, stage:iv, dead, 547 days
384.7
TCGA-FD-A43S-01A
71 years, female, white, stage:iii, alive, 455 days
381.7
TCGA-XF-AAMH-01A
80 years, male, white, stage:iv, dead, 344 days
381.0
TCGA-BT-A20R-01A
79 years, female, white, stage:iv, dead, 154 days
376.7
TCGA-FD-A3B8-01A
56 years, male, white, stage:ii, alive, 384 days
376.5
TCGA-GV-A3QF-01A
79 years, male, white, stage:iv, dead, 617 days
375.8
TCGA-DK-AA6R-01A
69 years, male, white, stage:iv, alive, 5041 days
370.3
TCGA-ZF-A9RN-01A
67 years, female, white, stage:iii, dead, 615 days
367.6
TCGA-FD-A3SN-01A
79 years, male, white, stage:iii, alive, 887 days
366.1
TCGA-SY-A9G0-01A
82 years, male, white, stage:iv, dead, 1008 days
357.7
TCGA-DK-A3WX-01A
67 years, female, white, stage:iii, dead, 321 days
356.1
TCGA-K4-A83P-01A
77 years, male, white, stage:iv, alive, 495 days
351.8
TCGA-XF-A9T2-01A
54 years, male, white, stage:iii, dead, 575 days
348.2
TCGA-ZF-A9RF-01A
74 years, male, white, stage:ii, alive, 1949 days
344.0
TCGA-E7-A7PW-01A
63 years, male, asian, stage:iii, alive, 416 days
342.8
TCGA-ZF-AA4U-01A
70 years, male, white, stage:iii, dead, 262 days
338.8
TCGA-BT-A42E-01A
74 years, male, white, stage:iii, alive, 1108 days
336.6
TCGA-4Z-AA86-01A
67 years, male, black or african american, stage:iv, dead, 311 days
336.3
TCGA-BT-A20Q-01A
73 years, male, white, stage:iv, dead, 593 days
334.3
TCGA-GU-A766-01A
62 years, male, white, stage:ii, alive, 480 days
333.5
TCGA-XF-A9SM-01A
76 years, male, white, stage:iii, alive, 1048 days
331.3
TCGA-PQ-A6FI-01A
70 years, male, white, stage:ii, alive, 372 days
329.1
TCGA-FD-A6TA-01A
58 years, male, white, stage:iv, alive, 1912 days
328.2
TCGA-ZF-A9R9-01A
58 years, male, white, stage:iv, dead, 864 days
327.9
TCGA-HQ-A5NE-01A
56 years, male, stage:iii, dead, 370 days
327.5
TCGA-FD-A3SL-01A
60 years, male, white, stage:iv, dead, 712 days
324.6
TCGA-FD-A3SS-01A
66 years, male, white, stage:iv, dead, 391 days
321.7
TCGA-BT-A2LB-01A
73 years, female, white, stage:iii, dead, 492 days
321.0
TCGA-XF-AAMG-01A
49 years, male, white, stage:iii, alive, 3364 days
320.4
TCGA-ZF-AA51-01A
69 years, female, white, stage:ii, alive, 1714 days
319.9
TCGA-UY-A8OD-01A
67 years, female, black or african american, stage:ii, alive, 3432 days
315.1
TCGA-FT-A61P-01A
76 years, male, white, stage:iv, alive, 337 days
310.4
TCGA-XF-A9SI-01A
73 years, female, asian, stage:ii, alive, 2423 days
309.6
TCGA-DK-A3IU-01A
58 years, male, white, stage:ii, dead, 706 days
308.2
TCGA-FD-A3B3-01A
74 years, female, white, stage:iii, dead, 974 days
304.2
TCGA-FD-A3B5-01A
86 years, male, black or african american, stage:iv, dead, 272 days
301.9
TCGA-LC-A66R-01A
78 years, male, white, stage:iv, alive, 466 days
299.2
TCGA-FD-A62P-01A
76 years, male, white, stage:ii, dead, 191 days
299.1
TCGA-BT-A20P-01A
81 years, female, white, stage:iii, dead, 544 days
298.6
TCGA-DK-A2HX-01A
80 years, female, white, stage:iv, dead, 1420 days
297.4
TCGA-UY-A78P-01A
78 years, female, white, stage:ii, alive, 2380 days
297.3
TCGA-FD-A6TI-01A
73 years, male, white, stage:iv, dead, 294 days
295.8
TCGA-ZF-AA4T-01A
65 years, male, white, stage:iv, dead, 599 days
294.5
TCGA-CU-A3KJ-01A
75 years, male, white, stage:iii, alive, 562 days
294.4
TCGA-UY-A9PD-01A
81 years, male, white, stage:iii, alive, 542 days
292.0
TCGA-FD-A3B4-01A
55 years, female, black or african american, stage:iii, dead, 510 days
286.2
TCGA-FD-A43N-01A
76 years, male, white, stage:iii, alive, 230 days
284.3
TCGA-XF-A8HF-01A
80 years, male, white, stage:iii, dead, 2954 days
284.2
TCGA-UY-A78L-01A
62 years, male, white, stage:iv, alive, 1127 days
280.9
TCGA-CF-A9FF-01A
52 years, male, asian, stage:ii, alive, 361 days
279.1
TCGA-XF-A9T6-01A
88 years, female, white, stage:iii, alive, 64 days
274.8
TCGA-BT-A20T-01A
63 years, male, white, stage:iv, dead, 453 days
268.5
TCGA-FD-A3NA-01A
60 years, male, white, stage:ii, alive, 1845 days
264.6
TCGA-ZF-A9RD-01A
75 years, female, white, stage:iv, dead, 408 days
262.3
TCGA-XF-A9ST-01A
68 years, male, white, stage:iii, dead, 128 days
261.3
TCGA-4Z-AA83-01A
52 years, male, white, stage:ii, alive, 2024 days
260.1
TCGA-GC-A6I1-01A
90 years, female, white, stage:ii, dead, 272 days
257.4
TCGA-K4-A4AC-01A
83 years, male, white, stage:ii, dead, 278 days
256.1
TCGA-BL-A13J-01A
65 years, male, white, stage:iv, dead, 81 days
256.0
TCGA-CU-A0YN-01A
60 years, male, white, stage:iii, dead, 393 days
255.6
TCGA-G2-A2EC-01A
58 years, female, black or african american, stage:ii, dead, 696 days
251.3
TCGA-ZF-AA56-01A
79 years, female, white, stage:iii, dead, 259 days
250.9
TCGA-FD-A6TH-01A
63 years, male, white, stage:iv, dead, 131 days
250.1
TCGA-G2-A2ES-01A
85 years, male, white, stage:ii, dead, 1004 days
248.0
TCGA-DK-A3IT-01A
62 years, male, white, stage:iii, alive, 648 days
247.6
TCGA-4Z-AA7W-01A
55 years, male, white, stage:ii, alive, 840 days
246.5
TCGA-E7-A519-01A
72 years, male, white, stage:ii, alive, 508 days
244.8
TCGA-GU-AATO-01A
75 years, male, white, stage:iv, dead, 324 days
242.6
TCGA-5N-A9KI-01A
76 years, female, white, stage:iii, dead, 76 days
238.7
TCGA-FD-A3SO-01A
68 years, male, white, stage:iv, dead, 168 days
235.9
TCGA-5N-A9KM-01A
73 years, female, white, stage:iii, dead, 530 days
233.2
TCGA-GC-A3OO-01A
79 years, male, white, stage:ii, alive, 481 days
231.6
TCGA-FD-A5BY-01A
63 years, female, white, stage:iii, alive, 251 days
231.5
TCGA-ZF-A9R0-01A
82 years, male, white, stage:iii, dead, 680 days
230.7
TCGA-XF-A9SV-01A
82 years, male, white, stage:iv, dead, 388 days
228.3
TCGA-K4-A4AB-01B
76 years, male, white, stage:iii, alive, 84 days
228.1
TCGA-YC-A9TC-01A
72 years, male, white, stage:iv, dead, 20 days
222.8
TCGA-DK-A2I4-01A
79 years, male, white, stage:iii, alive, 4343 days
216.4
TCGA-DK-A3WY-01A
67 years, female, white, stage:iii, alive, 4967 days
214.6
TCGA-K4-AAQO-01A
56 years, male, white, stage:iii, alive, 359 days
212.1
TCGA-K4-A6FZ-01A
75 years, female, white, stage:iii, alive, 55 days
211.4
TCGA-FD-A6TB-01A
82 years, male, white, stage:iii, alive, 572 days
208.2
TCGA-G2-A2EJ-01A
56 years, female, white, stage:ii, alive, 1460 days
208.1
TCGA-K4-A3WU-01B
88 years, male, white, stage:iii, alive, 105 days
207.0
TCGA-GU-A767-01A
81 years, male, white, stage:iv, dead, 144 days
205.1
TCGA-G2-AA3B-01A
75 years, female, white, stage:ii, alive, 2008 days
204.1
TCGA-DK-A6B2-01A
70 years, male, white, stage:iv, alive, 477 days
203.0
TCGA-FD-A6TG-01A
73 years, male, white, stage:iv, dead, 93 days
201.3
TCGA-XF-A9T0-01A
69 years, male, white, stage:iii, alive, 799 days
198.2
TCGA-G2-A2EF-01A
50 years, male, white, stage:ii, alive, 1884 days
195.3
TCGA-CU-A72E-01A
76 years, male, white, stage:iv, dead, 413 days
192.1
TCGA-DK-A6B1-01A
67 years, male, white, stage:ii, alive, 2049 days
191.8
TCGA-K4-A5RJ-01A
75 years, male, white, stage:ii, alive, 539 days
190.1
TCGA-KQ-A41S-01A
87 years, female, white, stage:iii, alive, 35 days
189.5
TCGA-XF-AAN3-01A
76 years, male, white, stage:iv, alive, 2625 days
187.5
TCGA-E7-A677-01A
81 years, male, asian, stage:ii, alive, 820 days
186.7
TCGA-K4-A3WV-01A
77 years, female, white, stage:ii, alive, 646 days
184.6
TCGA-XF-AAN5-01A
61 years, female, white, stage:iii, alive, 2293 days
183.9
TCGA-BT-A20N-01A
72 years, male, stage:iii, dead, 795 days
183.0
TCGA-R3-A69X-01A
70 years, male, white, stage:iii, alive, 433 days
181.4
TCGA-DK-A3X1-01A
78 years, female, white, stage:iii, alive, 2009 days
181.3
TCGA-CU-A5W6-01A
70 years, male, white, stage:iii, dead, 56 days
180.6
TCGA-XF-A9T5-01A
78 years, female, white, stage:iv, alive, 2027 days
179.6
TCGA-KQ-A41P-01A
76 years, male, white, stage:iv, alive, 1094 days
177.0
TCGA-KQ-A41Q-01A
89 years, male, white, stage:iii, alive, 1429 days
172.4
TCGA-UY-A9PH-01A
73 years, male, white, stage:ii, alive, 1561 days
169.7
TCGA-CF-A3MG-01A
48 years, male, asian, stage:ii, alive, 369 days
166.9
TCGA-E7-A6ME-01A
75 years, male, asian, stage:ii, alive, 731 days
165.8
TCGA-E7-A6MD-01A
66 years, male, white, stage:iv, alive, 129 days
165.4
TCGA-XF-AAMY-01A
78 years, male, white, stage:iii, alive, 3011 days
165.0
TCGA-GC-A3RC-01A
59 years, male, white, stage:ii, alive, 484 days
163.9
TCGA-2F-A9KT-01A
83 years, male, white, stage:ii, alive, 3314 days
163.5
TCGA-GU-AATQ-01A
69 years, male, white, stage:iii, dead, 213 days
163.5
TCGA-DK-AA6L-01A
48 years, male, white, stage:iv, dead, 1163 days
163.2
TCGA-BL-A0C8-01A
73 years, male, white, stage:i, alive, 1219 days
163.1
TCGA-GD-A2C5-01A
53 years, female, white, stage:iv, alive, 812 days
161.2
TCGA-XF-A9T8-01A
64 years, male, white, stage:iii, dead, 418 days
160.5
TCGA-K4-A6MB-01A
64 years, male, white, stage:iv, alive, 469 days
160.5
TCGA-BT-A0S7-01A
75 years, male, white, stage:iii, dead, 200 days
158.7
TCGA-XF-A8HH-01A
61 years, female, white, stage:iv, dead, 57 days
158.1
TCGA-2F-A9KW-01A
67 years, female, white, stage:iii, dead, 254 days
157.4
TCGA-BT-A20W-01A
71 years, male, white, stage:ii, dead, 254 days
156.8
TCGA-CF-A3MH-01A
75 years, male, asian, stage:ii, alive, 398 days
155.8
TCGA-E5-A2PC-01A
61 years, female, white, stage:iv, alive, 1326 days
155.5
TCGA-BT-A3PJ-01A
76 years, male, white, stage:iii, alive, 789 days
152.4
TCGA-ZF-AA4W-01A
56 years, male, white, stage:iii, alive, 1830 days
152.3
TCGA-4Z-AA7N-01A
66 years, male, white, stage:iii, dead, 1367 days
151.5
TCGA-CU-A0YR-01A
84 years, male, white, stage:iv, dead, 460 days
150.1
TCGA-BT-A20J-01A
75 years, male, white, stage:ii, dead, 579 days
149.6
TCGA-UY-A9PE-01A
87 years, male, white, stage:iv, alive, 189 days
148.7
TCGA-BT-A42F-01A
64 years, male, white, stage:iv, alive, 864 days
147.5
TCGA-BT-A20U-01A
70 years, female, white, stage:iii, dead, 455 days
146.5
TCGA-FJ-A3ZE-01A
65 years, male, white, stage:iv, dead, 324 days
145.1
TCGA-KQ-A41R-01A
80 years, female, white, stage:ii, alive, 1350 days
144.2
TCGA-S5-AA26-01A
46 years, male, black or african american, stage:iii, alive, 503 days
144.1
TCGA-FD-A3SJ-01A
59 years, male, white, stage:iv, dead, 739 days
143.0
TCGA-E7-A541-01A
66 years, male, white, stage:ii, dead, 778 days
141.8
TCGA-FJ-A3Z7-01A
76 years, male, white, stage:iv, alive, 945 days
140.7
TCGA-DK-A3IK-01A
87 years, male, white, stage:iv, dead, 146 days
140.4
TCGA-GV-A3JZ-01A
55 years, male, white, stage:iv, alive, 603 days
140.1
TCGA-FD-A5BR-01A
57 years, male, white, stage:ii, alive, 813 days
139.9
TCGA-GU-A42Q-01A
67 years, male, white, stage:iii, dead, 344 days
138.2
TCGA-FD-A3SR-01A
68 years, male, white, stage:iv, dead, 602 days
135.5
TCGA-E7-A97Q-01A
60 years, female, white, stage:iv, dead, 246 days
132.5
TCGA-XF-AAMX-01A
87 years, female, black or african american, stage:iii, dead, 206 days
131.1
TCGA-BT-A20V-01A
59 years, female, black or african american, stage:iv, dead, 154 days
130.8
TCGA-C4-A0F6-01A
82 years, female, stage:iii, alive, 700 days
130.6
TCGA-BT-A42C-01A
64 years, male, white, stage:ii, alive, 873 days
129.8
TCGA-GD-A3OP-01A
84 years, female, white, stage:iv, alive, 64 days
127.5
TCGA-CF-A8HX-01A
55 years, female, asian, stage:ii, alive, 345 days
121.0
TCGA-DK-A3WW-01A
57 years, male, white, stage:iii, alive, 633 days
120.3
TCGA-4Z-AA7S-01A
66 years, male, black or african american, stage:iii, dead, 1064 days
120.2
TCGA-CF-A9FL-01A
85 years, male, asian, stage:iii, dead, 565 days
117.1
TCGA-K4-A5RI-01A
67 years, female, white, stage:iii, dead, 356 days
117.0
TCGA-XF-AAN1-01A
75 years, female, stage:iii, dead, 941 days
116.6
TCGA-CF-A1HR-01A
62 years, male, asian, stage:iii, alive, 389 days
116.3
TCGA-GC-A3I6-01A
45 years, male, white, stage:iii, dead, 630 days
115.8
TCGA-DK-AA71-01A
71 years, male, white, stage:ii, alive, 415 days
113.3
TCGA-DK-A6B5-01A
45 years, male, white, stage:iv, alive, 1542 days
112.9
TCGA-DK-AA6P-01A
72 years, female, white, stage:ii, alive, 457 days
112.7
TCGA-UY-A78K-01A
60 years, male, white, stage:iv, dead, 536 days
112.0
TCGA-XF-A8HE-01A
47 years, male, white, stage:iii, alive, 3817 days
111.6
TCGA-CF-A47V-01A
52 years, male, asian, stage:ii, alive, 379 days
111.3
TCGA-ZF-A9R3-01A
53 years, female, white, stage:ii, dead, 949 days
110.9
TCGA-C4-A0EZ-01A
69 years, female, stage:iv, dead, 273 days
110.7
TCGA-CU-A0YO-01A
84 years, male, white, stage:iv, dead, 149 days
110.5
TCGA-UY-A78O-01A
74 years, female, white, stage:ii, alive, 2312 days
110.2
TCGA-CU-A3QU-01A
58 years, male, white, stage:iv, alive, 158 days
108.2
TCGA-DK-AA6X-01A
63 years, male, white, stage:ii, alive, 467 days
108.1
TCGA-FD-A5C0-01A
61 years, male, white, stage:iv, dead, 550 days
107.6
TCGA-BL-A3JM-01A
63 years, male, white, stage:iii, dead, 205 days
106.5
TCGA-KQ-A41O-01A
84 years, male, stage:iv, alive, 1538 days
104.9
TCGA-DK-A3IL-01A
79 years, female, white, stage:iv, dead, 413 days
104.0
TCGA-UY-A9PA-01A
48 years, male, white, stage:iii, alive, 119 days
104.0
TCGA-E7-A4XJ-01A
66 years, male, asian, stage:ii, dead, 68 days
103.5
TCGA-ZF-A9RM-01A
70 years, male, white, stage:ii, alive, 1455 days
103.3
TCGA-FD-A43P-01A
74 years, male, black or african american, stage:ii, alive, 832 days
101.7
TCGA-DK-A1AC-01A
72 years, male, white, stage:iii, alive, 3981 days
101.1
TCGA-CF-A8HY-01A
59 years, male, asian, stage:ii, alive, 345 days
101.0
TCGA-XF-AAMQ-01A
59 years, female, white, stage:ii, alive, 2177 days
100.5
TCGA-DK-AA6W-01A
79 years, male, white, stage:ii, dead, 415 days
100.0
TCGA-DK-A1AA-01A
57 years, male, white, stage:iii, alive, 578 days
99.7
TCGA-XF-AAML-01A
75 years, male, white, stage:ii, dead, 232 days
99.2
TCGA-UY-A78N-01A
79 years, male, white, stage:iv, dead, 2641 days
99.0
TCGA-BT-A3PH-01A
76 years, male, white, stage:iv, dead, 142 days
98.5
TCGA-4Z-AA7M-01A
65 years, male, white, stage:iii, alive, 495 days
97.6
TCGA-4Z-AA81-01A
80 years, male, white, stage:ii, dead, 1270 days
95.5
TCGA-DK-A1A3-01A
60 years, male, white, stage:iv, dead, 665 days
95.4
TCGA-CF-A7I0-01A
54 years, male, asian, stage:ii, alive, 368 days
95.4
TCGA-XF-AAN2-01A
73 years, male, white, stage:ii, dead, 1869 days
95.4
TCGA-XF-A8HI-01A
57 years, female, white, stage:iv, dead, 544 days
94.8
TCGA-2F-A9KO-01A
63 years, male, white, stage:iv, dead, 734 days
93.9
TCGA-E7-A3X6-01A
70 years, male, white, stage:ii, dead, 904 days
93.0
TCGA-DK-A1A6-01A
53 years, male, white, stage:iv, alive, 2020 days
92.0
TCGA-ZF-A9R7-01A
76 years, female, white, stage:ii, alive, 665 days
91.0
TCGA-DK-A6AW-01A
70 years, male, white, stage:ii, alive, 1621 days
90.8
TCGA-4Z-AA7Q-01A
79 years, male, white, stage:iii, dead, 510 days
90.4
TCGA-ZF-A9R1-01A
81 years, male, white, stage:iv, alive, 773 days
89.4
TCGA-E7-A8O7-01A
52 years, male, asian, stage:ii, alive, 466 days
89.3
TCGA-ZF-A9RE-01A
78 years, female, white, stage:ii, dead, 106 days
88.6
TCGA-CF-A3MI-01A
62 years, male, asian, stage:ii, alive, 370 days
87.3
TCGA-GC-A3WC-01A
80 years, female, white, stage:iii, alive, 540 days
85.6
TCGA-CF-A5UA-01A
67 years, male, asian, stage:ii, alive, 365 days
84.8
TCGA-FD-A6TE-01A
54 years, male, white, stage:iv, alive, 376 days
84.7
TCGA-2F-A9KQ-01A
69 years, male, white, stage:iii, alive, 2886 days
84.6
TCGA-4Z-AA7O-01A
64 years, male, black or african american, stage:ii, alive, 512 days
83.8
TCGA-FD-A62O-01A
74 years, male, white, stage:iv, dead, 216 days
83.6
TCGA-DK-AA77-01A
61 years, male, white, stage:ii, alive, 618 days
83.3
TCGA-MV-A51V-01A
75 years, male, white, stage:iii, alive, 410 days
83.2
TCGA-YF-AA3M-01A
57 years, male, stage:ii, alive, 415 days
82.0
TCGA-FD-A43X-01A
84 years, male, white, stage:ii, alive, 110 days
80.7
TCGA-GD-A76B-01A
86 years, female, white, stage:ii, dead, 224 days
80.5
TCGA-DK-AA6T-01A
63 years, male, white, stage:ii, alive, 572 days
78.6
TCGA-4Z-AA87-01A
72 years, male, black or african american, stage:iii, alive, 1454 days
78.3
TCGA-GU-A42P-01A
72 years, male, white, stage:iv, dead, 332 days
77.7
TCGA-XF-A9SH-01A
65 years, female, asian, stage:ii, dead, 1971 days
75.6
TCGA-CF-A47Y-01A
55 years, male, asian, stage:ii, alive, 373 days
75.5
TCGA-YF-AA3L-01A
47 years, female, stage:ii, alive, 364 days
75.4
TCGA-HQ-A5ND-01A
78 years, male, stage:iv, dead, 274 days
73.8
TCGA-KQ-A41N-01A
73 years, male, black or african american, stage:iii, alive, 1604 days
73.2
TCGA-GC-A3RD-01A
83 years, female, white, stage:iii, alive, 428 days
70.8
TCGA-G2-A3IB-01A
66 years, male, black or african american, stage:ii, dead, 220 days
70.6
TCGA-GV-A3JW-01A
74 years, male, white, stage:ii, alive, 649 days
70.5
TCGA-FD-A5BV-01A
47 years, female, white, stage:iii, dead, 163 days
69.7
TCGA-E7-A4IJ-01A
56 years, male, asian, stage:ii, dead, 674 days
69.6
TCGA-GV-A6ZA-01A
54 years, male, white, stage:ii, alive, 691 days
69.6
TCGA-DK-AA6U-01A
64 years, male, white, stage:ii, alive, 578 days
67.9
TCGA-E7-A3Y1-01A
57 years, male, white, stage:ii, alive, 163 days
67.8
TCGA-FJ-A3Z9-01A
72 years, male, white, dead, 385 days
67.8
TCGA-GV-A3JX-01A
59 years, male, white, stage:iii, alive, 581 days
67.2
TCGA-DK-A1AG-01A
66 years, male, white, stage:iii, alive, 475 days
67.0
TCGA-H4-A2HO-01A
53 years, male, white, stage:iii, alive, 46 days
63.6
TCGA-E7-A7XN-01A
67 years, male, asian, stage:iii, alive, 428 days
63.4
TCGA-CF-A47T-01A
58 years, female, asian, stage:ii, dead, 385 days
62.0
TCGA-XF-AAN0-01A
68 years, male, white, stage:iv, dead, 1718 days
62.0
TCGA-CU-A3YL-01A
67 years, male, white, stage:iii, alive, 906 days
61.8
TCGA-E7-A8O8-01A
59 years, male, asian, stage:ii, alive, 13 days
61.5
TCGA-FD-A3N6-01A
43 years, female, black or african american, stage:ii, alive, 851 days
61.1
TCGA-XF-AAMZ-01A
81 years, female, white, stage:iv, dead, 1348 days
61.0
TCGA-CF-A47W-01A
42 years, male, asian, stage:ii, alive, 368 days
60.7
TCGA-CF-A27C-01A
52 years, male, asian, stage:iii, alive, 425 days
60.1
TCGA-CF-A3MF-01A
34 years, male, asian, stage:iii, alive, 383 days
59.7
TCGA-DK-A1AD-01A
69 years, male, white, stage:iv, alive, 3420 days
59.3
TCGA-DK-A1A7-01A
67 years, female, white, stage:iv, alive, 560 days
58.6
TCGA-GV-A40G-01A
77 years, male, white, stage:ii, alive, 580 days
58.3
TCGA-DK-AA75-01A
82 years, male, white, stage:iii, dead, 340 days
58.1
TCGA-GV-A3QI-01A
47 years, male, white, stage:iii, alive, 1110 days
56.4
TCGA-DK-A3IM-01A
77 years, male, white, stage:iii, dead, 248 days
56.2
TCGA-BT-A2LA-01A
54 years, male, white, stage:iii, alive, 522 days
55.4
TCGA-UY-A9PF-01A
78 years, male, white, stage:iv, alive, 117 days
54.5
TCGA-H4-A2HQ-01A
64 years, female, black or african american, stage:iv, alive, 590 days
53.1
TCGA-G2-AA3F-01A
77 years, male, white, stage:iv, alive, 893 days
51.8
TCGA-ZF-AA4X-01A
56 years, male, white, stage:ii, alive, 2044 days
50.1
TCGA-DK-AA6Q-01A
61 years, female, white, stage:iv, dead, 413 days
50.1
TCGA-G2-A2EK-01A
57 years, male, white, stage:ii, alive, 485 days
49.9
TCGA-BT-A0YX-01A
70 years, female, white, stage:iii, dead, 400 days
49.7
TCGA-E7-A7DU-01A
73 years, male, white, stage:iii, alive, 28 days
48.5
TCGA-DK-A6AV-01A
82 years, female, asian, stage:ii, alive, 1952 days
47.9
TCGA-2F-A9KR-01A
59 years, female, stage:iii, dead, 3183 days
47.9
TCGA-CF-A47S-01A
41 years, male, asian, stage:ii, alive, 333 days
44.6
TCGA-DK-A3IS-01A
68 years, male, white, stage:ii, alive, 1529 days
43.7
TCGA-DK-A6B0-01A
61 years, male, white, stage:ii, alive, 2330 days
43.3
TCGA-GU-A42R-01A
68 years, male, white, stage:iv, dead, 577 days
42.4
TCGA-GC-A3RB-01A
54 years, male, white, stage:iii, alive, 582 days
41.7
TCGA-C4-A0F7-01A
77 years, male, stage:iv, dead, 62 days
41.4
TCGA-ZF-A9R2-01A
75 years, male, white, stage:ii, alive, 642 days
38.9
TCGA-E5-A4U1-01A
72 years, male, stage:ii, alive, 1181 days
38.7
TCGA-CF-A9FM-01A
50 years, male, asian, stage:i, alive, 398 days
38.0
TCGA-FJ-A3ZF-01A
73 years, male, white, stage:iii, alive, 524 days
37.7
TCGA-2F-A9KP-01A
66 years, male, white, stage:iv, dead, 364 days
35.9
TCGA-XF-A8HB-01A
50 years, female, stage:ii, alive, 1370 days
35.9
TCGA-DK-A1AE-01A
84 years, male, white, stage:iii, alive, 491 days
35.5
TCGA-DK-A3IV-01A
60 years, male, white, stage:ii, dead, 294 days
34.8
TCGA-G2-AA3D-01A
60 years, male, white, stage:iv, alive, 2139 days
34.3
TCGA-DK-A3X2-01A
85 years, male, white, stage:iv, dead, 547 days
34.1
TCGA-CF-A5U8-01A
59 years, male, asian, stage:ii, alive, 399 days
34.1
TCGA-G2-A3IE-01A
52 years, male, white, stage:ii, dead, 612 days
33.0
TCGA-4Z-AA89-01A
61 years, male, white, stage:iv, alive, 902 days
32.2
TCGA-XF-A8HC-01A
79 years, male, asian, stage:iv, dead, 200 days
31.0
TCGA-GV-A3QK-01B
56 years, female, white, stage:iv, alive, 832 days
30.9
TCGA-GC-A3BM-01A
70 years, male, white, stage:ii, dead, 651 days
30.2
TCGA-E7-A5KE-01A
78 years, female, asian, stage:ii, alive, 17 days
29.6
TCGA-G2-A2EL-01A
77 years, male, white, stage:ii, dead, 819 days
29.1
TCGA-E5-A4TZ-01A
64 years, male, white, stage:iv, dead, 467 days
26.8
TCGA-4Z-AA80-01A
73 years, male, white, stage:ii, dead, 19 days
26.6
TCGA-HQ-A2OF-01A
52 years, female, stage:iii, alive, 1947 days
25.3
TCGA-HQ-A2OE-01A
male, alive, 1174 days
24.6
TCGA-LT-A5Z6-01A
56 years, male, white, stage:ii, alive, 474 days
23.3
TCGA-GU-A763-01A
72 years, male, white, stage:iii, alive, 997 days
22.8
TCGA-LT-A8JT-01A
69 years, female, white, stage:ii, alive, 641 days
22.8
TCGA-G2-A3VY-01A
66 years, male, asian, stage:ii, alive, 536 days
22.0
TCGA-DK-A6B6-01A
57 years, male, white, stage:ii, alive, 1115 days
21.8
TCGA-GC-A4ZW-01A
71 years, male, white, stage:iii, alive, 15 days
21.3
TCGA-GV-A3QH-01A
67 years, male, white, stage:ii, dead, 258 days
18.9
TCGA-ZF-A9R4-01A
83 years, male, white, stage:ii, alive, 921 days
18.7
TCGA-ZF-A9RL-01A
61 years, male, white, stage:ii, alive, 2703 days
18.3
TCGA-DK-AA76-01A
64 years, female, white, stage:ii, alive, 366 days
18.1
TCGA-E7-A5KF-01A
67 years, male, asian, stage:ii, alive, 20 days
18.0
TCGA-E7-A6MF-01A
37 years, male, asian, stage:ii, alive, 750 days
17.1
TCGA-XF-A8HG-01A
69 years, male, white, stage:iii, dead, 467 days
17.0
TCGA-E7-A678-01A
55 years, male, asian, stage:iii, alive, 798 days
16.9
TCGA-ZF-A9R5-01A
59 years, male, white, stage:iii, alive, 1090 days
13.9
TCGA-CF-A47X-01A
60 years, male, asian, stage:ii, alive, 384 days
13.5
Show all
UROTHELIAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off).
The Human Protein Atlas project is funded
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