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SLC25A1
COLON - Expression summary
RNA expressioni
HPA:49.7TPM
GTEx:32.1RPKM
FANTOM5:85.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 49.7
overview Male, age 54 Sample 1
TPM: 81.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 39.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 49.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 70.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 21.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 45.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 53.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 38.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 42
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 49.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 61
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 50.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 43.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 32.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 22.4
Samples: 149

Max RPKM: 44.2
Min RPKM: 13.2
Std RPKM: 4.6
Median RPKM: 22.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 44.2
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 37.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 35.0
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 33.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 32.2
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 32.0
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 31.6
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 31.5
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 29.9
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 29.2
Show all
Colon - Transverse
RPKM: 39.4
Samples: 196

Max RPKM: 128.4
Min RPKM: 11.9
Std RPKM: 17.5
Median RPKM: 37.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 128.4
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 100.7
GTEX-144GN-1126-SM-5LU33 50-59 years, male 91.3
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 90.4
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 77.4
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 77.4
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 75.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 75.0
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 68.2
GTEX-R55G-1226-SM-48FDC 40-49 years, female 67.8
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 85.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 69.8
FF:10014-101C5 62,83,84 years, mixed 85.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.