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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 380.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 491.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 186.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 585.1
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 658.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 200.1
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 127.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 299.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 290.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 554.7
Min RPKM: 101.5
Std RPKM: 99.2
Median RPKM: 322.9
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
554.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
545.7
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
534.4
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
523.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
504.5
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
504.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
502.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
496.7
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
485.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
482.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
480.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
475.0
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
470.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
467.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
465.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
463.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
454.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
452.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
451.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
451.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
448.3
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
446.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
446.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
439.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
437.8
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
436.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
416.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
416.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
411.5
GTEX-11OF3-1826-SM-5987N
60-69 years, male
411.4
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
409.0
GTEX-117XS-2026-SM-5GID1
60-69 years, male
408.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
404.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
403.7
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
400.3
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
394.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
391.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
391.0
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
390.3
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
390.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
390.0
GTEX-11DXZ-2126-SM-59881
50-59 years, male
387.7
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
382.3
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
381.3
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
380.3
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
375.9
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
365.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
364.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
363.9
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
362.9
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
359.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
358.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
358.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
358.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
358.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
356.0
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
355.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
355.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
354.4
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
354.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
354.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
352.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
352.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
350.5
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
347.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
346.4
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
343.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
342.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
342.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
338.0
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
335.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
335.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
335.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
334.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
334.0
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
332.8
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
332.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
329.2
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
329.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
327.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
326.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
325.6
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
324.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
324.5
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
324.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
322.9
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
322.8
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
322.7
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
320.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
320.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
317.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
316.8
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
316.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
314.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
314.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
313.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
312.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
312.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
310.9
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
307.4
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
305.4
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
303.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
296.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
295.8
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
295.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
293.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
293.2
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
290.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
290.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
288.6
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
288.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
287.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
284.5
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
283.2
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
280.5
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
278.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
272.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
272.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
271.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
270.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
269.3
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
268.5
GTEX-R55C-1426-SM-48FED
40-49 years, male
267.6
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
267.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
267.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
260.5
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
258.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
257.9
GTEX-X261-2326-SM-4PQYU
50-59 years, male
257.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
255.0
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
254.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
249.0
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
240.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
235.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
234.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
232.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
230.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
227.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
227.4
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
227.0
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
226.5
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
224.8
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
223.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
216.5
GTEX-XPT6-1626-SM-4B655
20-29 years, male
214.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
208.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
200.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
196.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
196.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
190.3
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
188.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
187.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
187.1
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
182.7
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
170.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
169.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
169.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
168.6
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
164.2
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
163.7
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
161.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
158.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
157.5
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
153.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
152.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
141.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
137.4
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
130.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
129.3
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
120.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
109.0
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
101.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.