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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 38.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 153.0
Min RPKM: 32.5
Std RPKM: 20.5
Median RPKM: 87.2
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
153.0
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
140.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
128.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
117.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
116.5
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
116.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
114.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
113.8
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
113.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
113.2
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
111.8
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
111.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
110.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
109.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
108.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
108.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
107.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
106.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
106.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
105.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
103.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
102.4
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
101.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
101.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
100.8
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
100.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
100.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
100.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
99.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
98.4
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
98.2
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
98.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
98.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
98.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
97.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
95.9
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
95.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
95.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
95.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
94.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
92.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
91.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
91.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
90.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
90.7
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
89.2
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
88.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
88.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
88.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
88.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
88.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
88.1
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
88.1
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
88.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
87.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
87.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
87.2
GTEX-144FL-3026-SM-5O99C
50-59 years, male
86.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
86.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
85.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
85.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
85.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
84.9
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
84.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
84.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
83.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
83.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
83.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
82.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
82.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
82.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
82.0
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
81.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
81.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
81.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
80.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
80.0
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
79.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
78.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
78.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
78.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
78.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
77.9
GTEX-11GSP-3226-SM-5986O
60-69 years, female
77.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
77.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
77.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
76.4
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
75.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
74.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
73.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
73.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
73.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
72.9
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
72.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
71.3
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
70.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
69.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
68.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
67.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
66.6
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
62.6
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
58.6
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
57.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
56.4
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
55.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
55.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
49.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
47.2
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
46.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
45.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
41.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
39.2
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
32.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 84.0
Samples: 108
Max RPKM: 201.1
Min RPKM: 27.3
Std RPKM: 26.3
Median RPKM: 79.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
201.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
170.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
152.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
143.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
139.0
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
131.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
131.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
130.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
122.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
116.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
116.0
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
113.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
109.5
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
109.4
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
108.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
106.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
104.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
101.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
100.8
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
99.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
98.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
98.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
97.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
97.3
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
96.6
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
94.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
94.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
93.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
93.2
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
92.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
91.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
90.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
89.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
88.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
87.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
86.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
86.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
86.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
86.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
85.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
85.2
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
85.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
85.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
84.8
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
84.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
84.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
84.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
84.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
83.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
82.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
82.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
82.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
81.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
80.4
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
79.4
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
79.2
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
78.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
78.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
77.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
77.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
77.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
77.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
77.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
77.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
77.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
76.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
76.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
75.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
75.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
74.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
73.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
73.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
73.5
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
73.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
72.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
72.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
72.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
71.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
71.7
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
70.7
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
70.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
70.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
68.8
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
68.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
68.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
67.7
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
66.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
66.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
65.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
64.5
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
64.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
64.2
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
63.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
62.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
60.6
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
58.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
57.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
55.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
55.4
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
48.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
47.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
47.1
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
46.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
46.1
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
42.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
40.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
36.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
27.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.