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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 163.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 114.7
Min RPKM: 17.1
Std RPKM: 21.0
Median RPKM: 67.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
114.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
101.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
101.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
98.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
97.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
96.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
96.2
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
94.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
93.7
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
93.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
92.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
91.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
91.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
90.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
90.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
90.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
89.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
89.9
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
89.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
88.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
88.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
88.2
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
87.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
87.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
87.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
86.7
GTEX-145MF-2726-SM-5O995
50-59 years, male
86.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
84.9
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
84.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
82.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
82.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
82.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
81.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
79.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
78.9
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
78.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
75.8
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
75.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
74.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
74.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
74.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
73.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
73.6
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
72.6
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
71.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
71.7
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
71.5
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
71.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
70.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
70.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
69.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
69.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
68.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
67.8
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
67.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
67.3
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
67.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
67.3
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
66.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
66.4
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
66.2
GTEX-1128S-2726-SM-5H12C
60-69 years, female
65.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
65.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
64.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
64.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
63.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
63.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
62.6
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
61.4
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
61.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
60.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
60.4
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
59.2
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
58.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
57.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
57.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
57.6
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
57.4
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
57.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
56.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
55.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
55.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
55.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
54.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
53.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
53.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
52.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
52.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
50.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
50.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
49.7
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
49.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
48.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
48.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
48.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
45.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
45.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
42.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
42.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
38.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
35.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
35.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
34.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
30.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
30.0
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
29.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
28.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
27.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
27.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
26.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
25.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
23.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
23.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
17.1
Show all
Brain - Frontal Cortex (BA9) RPKM: 57.1
Samples: 108
Max RPKM: 106.2
Min RPKM: 14.4
Std RPKM: 22.7
Median RPKM: 59.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
106.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
105.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
102.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
100.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
96.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
92.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
90.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
87.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
87.1
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
86.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
82.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
82.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
81.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
80.5
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
77.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
77.3
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
77.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
77.0
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
76.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
75.7
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
75.1
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
75.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
74.9
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
74.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
74.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
74.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
73.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
73.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
73.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
72.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
72.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
72.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
72.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
71.2
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
71.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
70.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
70.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
70.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
70.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
69.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
69.5
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
68.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
68.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
68.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
67.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
67.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
67.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
65.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
64.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
63.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
62.4
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
62.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
60.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
60.1
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
57.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
57.9
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
57.1
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
57.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
56.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
55.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
55.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
54.0
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
53.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
53.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
53.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
52.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
51.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
49.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
49.1
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
48.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
47.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
47.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
46.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
46.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
46.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
44.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
43.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
43.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
43.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
42.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
41.5
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
39.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
39.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
39.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
39.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
38.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
36.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
35.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
32.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
30.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
30.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
27.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
26.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
25.6
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
24.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
22.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
21.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
21.4
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
21.2
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
21.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
18.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
18.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
18.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
17.0
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
16.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
15.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
14.6
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
14.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.