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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 218.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 341.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 16.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2790.7
Min RPKM: 1.8
Std RPKM: 365.7
Median RPKM: 32.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
2790.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
2413.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
1688.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
1553.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
1434.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
1389.5
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
1212.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
1198.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
1074.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
1041.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
870.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
733.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
686.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
657.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
565.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
532.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
528.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
512.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
459.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
454.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
404.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
392.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
379.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
376.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
340.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
336.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
330.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
328.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
314.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
309.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
302.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
296.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
280.5
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
273.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
242.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
241.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
220.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
214.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
201.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
193.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
190.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
177.9
GTEX-REY6-2426-SM-48FF5
60-69 years, male
168.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
167.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
154.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
141.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
135.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
134.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
130.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
124.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
114.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
113.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
106.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
105.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
104.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
103.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
100.4
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
99.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
97.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
95.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
94.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
94.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
89.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
89.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
88.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
88.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
84.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
83.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
83.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
79.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
78.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
75.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
74.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
73.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
69.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
69.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
65.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
64.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
64.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
64.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
63.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
61.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
60.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
59.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
58.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
55.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
55.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
54.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
53.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
53.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
53.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
48.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
45.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
44.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
44.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
40.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
38.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
37.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
37.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
36.9
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
35.4
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
34.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
34.8
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
34.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
33.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
32.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
32.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
32.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
32.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
30.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
29.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
29.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
29.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
28.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
28.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
28.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
27.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
27.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
25.9
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
25.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
25.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
24.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
23.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
23.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
21.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
21.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
20.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
19.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
19.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
19.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
19.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
18.9
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
18.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
17.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
17.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
17.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
17.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
16.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
16.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
16.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
16.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
16.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
15.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
15.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
15.5
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
13.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
13.6
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
13.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
13.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
12.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
12.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
12.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
12.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
12.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
11.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
11.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
10.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
10.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
10.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
10.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
9.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
9.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
9.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
9.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
8.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
8.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
8.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
8.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
8.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
8.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
7.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
7.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
7.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
7.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
7.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
7.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
7.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
7.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
7.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
6.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
6.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
6.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
6.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
6.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
6.3
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
6.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
5.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
5.6
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
5.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
5.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
5.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
5.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
5.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
4.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
4.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
4.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
4.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
4.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
4.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
4.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
3.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
3.8
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
3.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
3.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
3.3
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
3.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
3.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
2.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
2.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
2.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
2.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
2.3
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
2.1
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.