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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1308.9
Min RPKM: 207.5
Std RPKM: 148.9
Median RPKM: 348.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
1308.9
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
768.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
728.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
718.1
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
677.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
649.3
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
602.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
582.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
560.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
526.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
510.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
500.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
498.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
498.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
494.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
488.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
470.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
457.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
446.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
437.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
420.0
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
418.3
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
414.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
413.3
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
412.4
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
400.3
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
400.2
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
393.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
393.2
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
391.4
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
385.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
384.3
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
383.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
375.2
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
373.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
373.0
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
370.1
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
369.1
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
367.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
365.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
361.6
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
359.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
357.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
356.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
355.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
351.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
349.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
349.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
348.4
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
342.9
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
337.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
326.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
323.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
321.4
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
318.7
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
315.9
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
315.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
314.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
314.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
312.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
309.8
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
309.3
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
306.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
306.1
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
303.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
302.0
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
301.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
299.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
298.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
298.3
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
297.5
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
295.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
292.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
291.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
288.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
285.5
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
284.7
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
282.6
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
277.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
276.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
276.0
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
270.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
266.8
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
266.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
265.6
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
262.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
262.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
260.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
251.7
GTEX-11I78-2026-SM-5987C
50-59 years, female
251.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
248.5
GTEX-S341-1226-SM-4AD5S
40-49 years, female
247.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
242.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
236.0
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
208.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
207.5
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.