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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 690.7
Min RPKM: 136.4
Std RPKM: 95.7
Median RPKM: 239.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
690.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
645.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
615.8
GTEX-Q734-0226-SM-48U1A
40-49 years, female
568.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
566.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
449.4
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
397.6
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
380.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
347.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
344.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
344.5
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
329.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
328.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
324.5
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
324.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
324.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
321.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
314.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
310.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
310.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
306.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
303.0
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
301.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
301.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
294.5
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
292.3
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
292.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
291.6
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
287.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
285.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
282.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
281.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
277.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
271.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
263.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
263.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
262.6
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
260.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
259.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
257.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
256.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
256.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
255.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
253.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
253.5
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
253.3
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
252.4
GTEX-PX3G-0926-SM-48U12
20-29 years, female
252.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
250.6
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
249.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
246.3
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
239.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
239.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
236.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
235.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
235.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
234.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
232.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
229.1
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
226.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
226.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
226.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
224.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
223.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
223.2
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
223.0
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
222.8
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
222.2
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
220.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
220.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
220.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
220.3
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
220.2
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
219.2
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
216.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
216.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
213.3
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
211.5
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
210.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
207.8
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
206.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
204.5
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
204.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
202.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
199.8
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
197.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
197.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
194.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
194.4
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
194.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
192.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
192.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
192.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
192.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
191.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
189.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
188.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
188.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
182.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
180.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
175.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
174.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
153.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
136.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.