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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1920.6
Min RPKM: 439.9
Std RPKM: 247.2
Median RPKM: 667.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
1920.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1297.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1277.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1227.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1207.0
GTEX-Q734-0726-SM-48TZP
40-49 years, female
1197.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1155.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1112.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1078.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1069.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1063.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1048.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1002.7
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1000.0
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
997.6
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
988.5
GTEX-RU72-2226-SM-46MUE
50-59 years, female
959.5
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
947.1
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
928.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
924.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
897.7
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
894.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
886.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
869.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
865.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
861.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
840.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
839.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
838.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
809.9
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
809.4
GTEX-P78B-1926-SM-3P616
40-49 years, female
809.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
808.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
804.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
783.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
771.0
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
755.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
754.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
744.8
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
735.9
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
731.3
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
724.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
724.1
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
716.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
709.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
703.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
701.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
687.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
667.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
660.6
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
660.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
657.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
655.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
655.7
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
638.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
625.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
623.2
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
617.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
608.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
606.8
GTEX-11I78-1926-SM-59878
50-59 years, female
603.8
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
602.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
593.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
582.2
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
581.7
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
579.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
569.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
567.3
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
563.3
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
561.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
549.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
546.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
544.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
542.1
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
541.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
530.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
526.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
522.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
520.5
GTEX-S341-0726-SM-4AD5R
40-49 years, female
518.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
514.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
514.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
511.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
507.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
505.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
504.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
492.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
491.6
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
490.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
480.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
468.5
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
466.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
463.9
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
461.9
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
455.7
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
452.2
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
439.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.