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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1080.6
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 662.5
Min RPKM: 116.7
Std RPKM: 106.9
Median RPKM: 370.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
662.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
622.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
607.4
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
601.1
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
598.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
593.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
588.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
585.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
514.1
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
504.0
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
493.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
491.4
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
490.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
486.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
484.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
483.3
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
476.5
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
475.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
473.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
471.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
465.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
464.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
461.0
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
442.5
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
442.1
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
441.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
437.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
433.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
430.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
429.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
424.7
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
420.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
419.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
418.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
418.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
418.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
416.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
415.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
415.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
413.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
413.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
412.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
410.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
410.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
401.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
401.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
399.5
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
396.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
394.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
392.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
389.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
388.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
383.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
379.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
375.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
373.5
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
371.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
369.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
369.1
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
361.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
360.4
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
359.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
358.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
354.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
352.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
350.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
345.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
343.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
343.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
343.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
337.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
336.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
335.5
GTEX-145MF-2726-SM-5O995
50-59 years, male
335.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
329.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
327.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
324.9
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
323.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
323.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
321.5
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
318.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
316.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
312.0
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
302.7
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
302.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
300.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
298.2
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
297.1
GTEX-144FL-3026-SM-5O99C
50-59 years, male
291.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
290.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
288.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
280.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
280.4
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
264.4
GTEX-11GSP-3226-SM-5986O
60-69 years, female
260.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
256.4
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
252.3
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
251.4
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
249.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
246.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
243.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
238.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
226.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
225.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
225.5
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
218.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
205.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
204.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
199.6
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
196.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
190.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
179.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
165.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
116.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 409.6
Samples: 108
Max RPKM: 829.6
Min RPKM: 96.5
Std RPKM: 144.5
Median RPKM: 424.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
829.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
801.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
764.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
707.8
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
695.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
631.2
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
575.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
567.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
559.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
552.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
551.2
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
550.9
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
548.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
544.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
536.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
535.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
534.3
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
534.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
534.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
531.8
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
526.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
518.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
518.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
516.7
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
516.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
513.3
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
509.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
507.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
504.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
498.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
497.9
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
485.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
483.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
478.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
476.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
472.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
471.1
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
469.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
460.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
456.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
454.6
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
453.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
451.8
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
451.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
449.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
447.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
445.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
444.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
440.9
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
439.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
436.3
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
433.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
432.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
426.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
422.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
419.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
417.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
417.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
416.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
408.8
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
408.4
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
407.8
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
407.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
403.5
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
386.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
385.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
380.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
373.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
373.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
373.4
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
366.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
361.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
361.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
359.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
357.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
346.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
338.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
335.1
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
317.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
314.1
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
308.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
305.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
303.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
294.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
292.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
291.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
277.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
274.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
270.9
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
267.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
241.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
236.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
234.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
231.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
231.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
207.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
207.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
199.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
198.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
192.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
175.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
168.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
164.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
158.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
133.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
123.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
119.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
96.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.