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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 644.4
Min RPKM: 55.4
Std RPKM: 102.1
Median RPKM: 237.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
644.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
598.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
550.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
539.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
439.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
428.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
369.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
362.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
357.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
350.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
347.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
345.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
331.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
327.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
327.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
323.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
319.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
318.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
312.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
310.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
309.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
304.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
299.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
296.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
294.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
291.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
288.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
287.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
286.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
285.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
280.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
279.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
278.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
277.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
274.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
273.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
270.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
270.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
269.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
269.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
266.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
266.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
264.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
264.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
262.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
261.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
260.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
254.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
253.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
253.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
251.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
249.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
247.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
244.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
242.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
242.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
241.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
241.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
237.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
236.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
235.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
234.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
230.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
219.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
219.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
216.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
215.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
212.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
210.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
209.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
207.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
207.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
204.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
199.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
196.0
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
195.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
193.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
188.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
187.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
186.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
183.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
182.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
179.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
177.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
176.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
176.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
175.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
172.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
172.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
167.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
166.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
161.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
155.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
155.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
155.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
151.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
148.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
144.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
143.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
143.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
142.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
134.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
132.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
127.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
125.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
117.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
115.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
94.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
92.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
92.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
84.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
83.4
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
79.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
77.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
72.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
67.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
55.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.