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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 2650.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1673.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1101.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 651.3
Min RPKM: 113.3
Std RPKM: 75.6
Median RPKM: 229.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
651.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
542.9
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
483.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
450.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
449.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
443.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
439.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
432.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
403.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
399.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
389.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
387.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
384.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
382.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
380.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
362.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
352.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
346.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
339.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
335.0
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
334.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
333.4
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
329.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
325.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
324.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
323.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
322.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
320.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
320.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
318.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
317.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
315.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
314.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
310.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
308.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
308.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
305.2
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
303.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
301.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
299.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
299.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
297.5
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
297.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
297.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
291.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
291.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
291.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
290.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
288.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
288.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
288.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
287.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
286.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
282.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
279.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
277.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
277.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
272.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
269.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
268.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
265.9
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
265.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
264.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
263.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
263.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
261.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
261.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
260.5
GTEX-117YX-1426-SM-5H12H
50-59 years, male
259.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
259.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
259.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
258.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
258.1
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
255.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
254.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
254.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
252.3
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
252.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
250.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
250.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
249.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
249.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
246.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
245.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
245.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
243.4
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
243.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
242.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
240.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
240.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
239.1
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
238.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
238.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
238.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
236.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
235.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
235.0
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
235.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
233.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
233.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
232.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
232.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
232.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
231.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
230.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
229.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
229.5
GTEX-13113-1726-SM-5GCOO
60-69 years, female
229.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
229.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
228.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
228.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
227.7
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
227.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
226.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
226.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
226.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
225.8
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
225.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
223.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
223.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
222.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
222.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
222.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
222.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
221.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
221.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
219.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
219.8
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
219.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
217.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
217.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
215.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
214.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
214.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
213.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
212.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
212.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
212.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
212.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
211.7
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
211.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
211.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
211.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
209.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
208.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
207.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
207.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
207.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
207.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
207.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
206.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
206.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
204.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
204.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
204.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
203.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
203.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
201.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
199.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
198.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
197.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
196.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
195.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
195.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
195.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
195.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
195.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
194.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
193.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
193.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
193.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
190.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
190.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
189.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
188.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
188.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
186.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
183.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
182.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
180.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
178.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
178.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
177.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
177.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
176.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
175.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
175.4
GTEX-144GM-0926-SM-5O994
20-29 years, male
174.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
173.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
171.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
170.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
169.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
168.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
167.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
167.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
167.0
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
162.7
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
162.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
161.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
161.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
159.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
159.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
158.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
156.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
154.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
147.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
144.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
139.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
139.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
136.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
134.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
126.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
123.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
113.3
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.