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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 292.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 308.2
Min RPKM: 65.2
Std RPKM: 51.6
Median RPKM: 198.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
308.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
285.4
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
273.7
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
269.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
265.6
GTEX-X585-3026-SM-46MWF
50-59 years, male
265.0
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
264.8
GTEX-WL46-2926-SM-3LK82
50-59 years, male
255.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
253.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
250.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
249.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
241.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
240.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
238.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
237.9
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
237.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
237.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
236.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
234.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
234.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
231.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
228.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
228.7
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
228.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
228.1
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
227.8
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
227.2
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
226.4
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
225.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
224.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
224.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
223.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
220.2
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
219.3
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
219.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
218.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
218.6
GTEX-145MF-2726-SM-5O995
50-59 years, male
217.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
216.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
215.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
215.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
214.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
214.2
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
213.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
213.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
212.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
211.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
209.9
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
208.5
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
206.9
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
203.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
202.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
201.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
201.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
200.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
199.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
198.8
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
197.7
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
193.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
189.2
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
182.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
182.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
181.8
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
181.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
181.4
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
181.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
179.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
178.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
178.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
177.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
172.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
171.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
169.9
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
168.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
166.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
162.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
162.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
162.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
161.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
159.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
156.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
153.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
151.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
145.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
141.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
141.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
140.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
139.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
138.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
138.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
138.1
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
136.7
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
135.7
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
135.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
128.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
128.3
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
128.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
127.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
120.2
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
118.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
115.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
112.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
110.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
107.1
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
107.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
106.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
106.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
106.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
91.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
89.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
87.1
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
79.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
78.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
65.2
Show all
Brain - Frontal Cortex (BA9) RPKM: 175.1
Samples: 108
Max RPKM: 317.7
Min RPKM: 52.6
Std RPKM: 65.2
Median RPKM: 188.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
317.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
296.7
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
295.8
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
292.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
285.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
263.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
259.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
259.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
257.7
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
255.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
253.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
251.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
246.6
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
246.2
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
244.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
243.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
239.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
238.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
237.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
236.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
231.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
230.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
228.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
226.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
223.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
223.0
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
221.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
221.3
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
220.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
220.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
218.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
217.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
217.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
217.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
215.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
214.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
213.9
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
213.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
209.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
207.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
207.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
205.0
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
203.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
202.4
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
202.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
201.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
199.7
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
199.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
198.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
198.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
197.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
197.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
195.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
189.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
187.7
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
186.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
186.2
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
185.7
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
185.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
183.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
178.6
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
175.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
173.8
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
172.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
164.5
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
161.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
158.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
154.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
151.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
148.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
147.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
146.0
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
142.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
141.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
134.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
133.6
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
133.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
119.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
118.6
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
115.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
114.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
112.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
112.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
109.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
103.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
101.4
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
99.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
96.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
96.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
94.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
94.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
92.7
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
92.1
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
86.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
86.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
86.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
83.2
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
81.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
79.7
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
77.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
73.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
73.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
70.4
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
67.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
63.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
56.8
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
54.6
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
52.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.