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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 259.9
Min RPKM: 22.7
Std RPKM: 57.4
Median RPKM: 135.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
259.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
246.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
231.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
229.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
228.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
220.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
217.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
215.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
211.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
210.7
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
209.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
208.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
206.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
203.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
200.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
200.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
199.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
195.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
195.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
194.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
193.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
192.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
190.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
189.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
188.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
183.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
183.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
183.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
182.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
182.6
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
176.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
174.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
174.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
173.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
171.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
169.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
165.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
160.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
158.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
157.9
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
157.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
157.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
156.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
155.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
154.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
153.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
153.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
152.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
151.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
150.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
147.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
147.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
145.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
143.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
143.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
141.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
138.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
137.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
135.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
135.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
135.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
134.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
133.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
132.8
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
132.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
132.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
130.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
130.6
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
130.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
118.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
116.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
113.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
112.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
111.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
107.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
107.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
107.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
105.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
104.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
103.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
101.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
100.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
100.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
99.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
97.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
96.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
88.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
87.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
85.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
84.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
79.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
77.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
77.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
75.9
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
72.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
71.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
71.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
68.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
61.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
60.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
60.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
59.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
53.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
53.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
52.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
50.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
49.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
47.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
41.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
40.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
38.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
34.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
33.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
32.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
30.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
23.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
22.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.