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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 765.5
Min RPKM: 14.2
Std RPKM: 163.4
Median RPKM: 141.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
765.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
703.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
651.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
624.5
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
557.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
555.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
535.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
532.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
464.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
383.2
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
375.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
369.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
357.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
343.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
334.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
334.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
280.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
279.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
270.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
265.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
253.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
249.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
249.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
243.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
242.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
239.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
235.7
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
231.8
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
230.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
228.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
226.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
224.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
214.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
212.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
207.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
206.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
202.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
195.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
195.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
183.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
168.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
168.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
167.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
157.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
148.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
148.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
147.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
134.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
132.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
130.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
130.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
126.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
123.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
118.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
113.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
109.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
107.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
105.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
100.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
95.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
92.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
90.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
90.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
90.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
88.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
88.6
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
85.7
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
85.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
83.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
77.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
74.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
72.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
69.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
68.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
63.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
62.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
59.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
58.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
57.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
57.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
55.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
55.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
49.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
49.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
42.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
39.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
39.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
35.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
30.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
30.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
25.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
18.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
16.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
14.2
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.