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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 78.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 180.9
Min RPKM: 24.9
Std RPKM: 18.0
Median RPKM: 39.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
180.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
98.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
82.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
76.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
70.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
69.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
66.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
65.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
64.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
64.5
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
64.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
63.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
61.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
59.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
58.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
56.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
56.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
56.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
55.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
55.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
54.2
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
53.7
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
53.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
52.6
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
49.3
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
49.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
47.8
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
47.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
47.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
47.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
46.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
46.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
46.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
46.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
45.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
45.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
44.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
44.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
44.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
43.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
43.6
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
43.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
42.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
42.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
41.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
41.8
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
41.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
41.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
41.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
40.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
40.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
40.4
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
40.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
39.8
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
39.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
39.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
39.5
GTEX-11GSP-3226-SM-5986O
60-69 years, female
39.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
39.2
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
39.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
39.0
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
38.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
38.5
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
38.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
38.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
38.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
37.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
37.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
37.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
37.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
37.3
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
37.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
36.8
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
36.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
36.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
35.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
35.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
35.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
35.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
35.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
35.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
34.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
34.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
34.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
34.5
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
34.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
34.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
33.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
33.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
33.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
33.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
33.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
32.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
32.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
32.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
32.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
32.2
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
31.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
31.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
31.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
31.3
GTEX-11PRG-2926-SM-5987A
50-59 years, male
30.8
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
30.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
30.4
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
29.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
28.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
28.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
28.0
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
27.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
27.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
26.7
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
26.5
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
25.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
24.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 32.2
Samples: 108
Max RPKM: 65.6
Min RPKM: 13.4
Std RPKM: 9.0
Median RPKM: 30.9
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
65.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
57.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
56.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
50.0
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
48.8
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
48.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
48.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
47.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
45.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
43.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
43.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
43.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
43.1
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
42.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
42.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
41.3
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
40.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
40.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
40.5
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
39.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
39.2
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
38.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
38.6
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
38.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
37.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
36.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
36.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
36.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
36.2
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
36.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
35.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
35.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
35.3
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
35.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
35.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
35.0
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
34.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
34.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
34.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
33.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
33.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
33.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
33.3
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
33.1
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
32.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
32.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
32.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
32.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
31.9
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
31.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
31.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
31.2
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
31.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
30.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
30.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
30.7
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
30.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
30.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
30.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
30.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
29.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
29.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
29.7
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
29.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
29.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
29.4
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
29.4
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
29.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
29.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
29.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
28.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
28.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
27.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
27.7
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
27.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
27.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
26.9
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
26.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
26.2
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
26.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
25.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
25.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
25.3
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
25.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
25.2
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
25.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
24.8
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
24.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
24.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
24.3
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
23.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
23.4
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
23.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
23.2
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
23.0
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
22.6
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
22.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
21.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
21.4
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
20.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
20.0
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
19.9
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
19.5
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
18.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
17.7
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
17.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
16.8
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
13.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
