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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 190.1
Min RPKM: 66.0
Std RPKM: 20.6
Median RPKM: 111.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
190.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
163.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
161.7
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
154.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
143.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
141.3
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
140.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
139.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
139.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
138.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
138.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
137.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
136.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
136.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
135.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
135.5
GTEX-13111-0126-SM-5EGHO
50-59 years, male
132.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
131.0
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
130.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
130.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
129.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
129.0
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
129.0
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
127.2
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
126.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
126.4
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
126.1
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
125.7
GTEX-PX3G-0926-SM-48U12
20-29 years, female
125.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
123.5
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
121.7
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
120.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
120.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
119.3
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
118.2
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
117.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
117.5
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
116.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
116.4
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
116.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
116.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
115.5
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
114.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
114.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
114.5
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
113.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
113.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
113.6
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
112.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
112.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
111.7
GTEX-144GN-2126-SM-5O99D
50-59 years, male
111.7
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
111.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
109.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
109.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
108.5
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
108.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
108.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
108.0
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
107.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
106.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
105.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
104.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
104.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
103.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
103.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
102.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
102.0
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
101.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
100.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
100.2
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
100.2
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
99.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
99.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
98.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
98.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
98.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
98.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
97.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
97.1
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
95.8
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
95.8
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
93.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
93.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
93.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
93.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
93.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
92.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
92.2
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
91.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
89.2
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
88.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
88.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
87.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
86.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
86.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
85.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
84.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
83.6
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
80.2
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
80.0
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
78.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
76.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
66.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.