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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 608.0
Min RPKM: 97.1
Std RPKM: 126.5
Median RPKM: 378.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
608.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
582.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
561.0
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
553.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
551.0
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
543.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
542.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
534.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
531.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
524.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
507.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
503.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
495.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
488.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
483.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
482.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
480.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
477.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
476.7
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
472.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
470.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
458.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
455.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
454.1
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
452.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
449.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
446.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
446.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
444.8
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
440.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
439.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
439.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
431.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
425.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
416.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
413.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
411.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
410.6
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
408.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
406.0
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
405.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
400.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
390.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
385.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
385.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
381.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
380.1
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
376.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
365.6
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
354.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
353.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
337.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
332.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
328.2
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
327.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
322.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
319.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
319.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
319.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
315.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
312.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
309.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
307.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
302.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
297.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
293.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
291.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
289.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
282.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
282.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
269.3
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
258.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
256.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
244.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
239.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
225.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
225.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
224.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
217.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
210.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
210.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
192.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
192.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
179.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
173.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
166.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
162.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
156.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
139.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
127.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
117.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
102.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
98.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
97.1
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.