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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 672.5
Min RPKM: 135.9
Std RPKM: 107.3
Median RPKM: 380.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
672.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
622.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
611.1
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
556.9
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
540.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
525.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
522.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
520.5
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
519.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
516.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
514.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
512.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
510.2
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
502.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
497.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
491.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
484.7
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
484.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
479.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
474.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
473.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
469.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
467.2
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
465.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
465.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
459.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
457.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
456.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
455.8
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
455.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
453.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
453.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
450.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
448.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
445.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
440.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
440.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
439.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
438.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
438.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
437.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
430.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
426.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
424.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
423.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
422.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
421.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
417.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
414.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
413.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
411.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
409.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
404.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
399.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
397.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
388.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
387.8
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
382.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
380.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
379.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
377.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
375.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
370.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
368.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
368.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
368.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
366.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
366.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
351.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
349.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
348.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
343.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
340.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
338.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
336.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
328.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
327.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
323.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
322.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
320.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
316.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
315.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
312.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
308.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
308.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
305.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
305.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
302.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
292.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
291.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
286.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
284.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
281.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
278.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
277.1
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
273.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
265.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
265.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
264.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
264.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
253.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
240.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
236.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
236.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
232.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
232.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
231.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
225.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
223.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
208.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
205.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
196.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
179.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
170.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
153.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
145.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
135.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.