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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 851.3
Min RPKM: 187.3
Std RPKM: 133.1
Median RPKM: 448.7
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
851.3
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
837.7
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
792.2
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
717.9
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
699.2
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
675.1
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
665.9
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
614.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
601.0
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
595.6
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
592.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
590.9
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
574.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
572.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
567.9
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
560.8
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
559.9
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
553.6
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
549.0
GTEX-1192X-2526-SM-59868
50-59 years, male
544.6
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
544.6
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
539.5
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
533.4
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
531.6
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
529.2
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
522.2
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
519.2
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
516.1
GTEX-13O61-1326-SM-5KM31
60-69 years, male
513.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
512.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
511.5
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
510.2
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
507.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
489.8
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
488.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
483.9
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
479.8
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
476.1
GTEX-13113-1226-SM-5EGHT
60-69 years, female
472.5
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
472.3
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
467.7
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
466.1
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
453.1
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
451.0
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
446.4
GTEX-117YX-0326-SM-5GICL
50-59 years, male
445.5
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
444.4
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
441.6
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
434.8
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
430.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
426.4
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
422.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
422.4
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
411.4
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
410.0
GTEX-13111-1426-SM-5DUW3
50-59 years, male
408.4
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
407.0
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
401.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
397.5
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
393.9
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
390.5
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
386.7
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
379.0
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
373.5
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
365.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
364.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
364.4
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
361.0
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
353.1
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
349.6
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
348.0
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
345.1
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
341.4
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
334.2
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
333.4
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
323.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
318.9
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
317.1
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
314.9
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
287.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
265.8
GTEX-1122O-1326-SM-5H11F
60-69 years, female
265.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
257.6
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
243.5
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
237.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
223.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
196.6
GTEX-111YS-1426-SM-5GID8
60-69 years, male
187.3
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.