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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1713.4
Min RPKM: 653.5
Std RPKM: 199.3
Median RPKM: 976.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1713.4
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1701.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1316.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1311.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1287.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1276.5
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1273.1
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1269.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1248.8
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1248.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1247.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1247.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1241.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1230.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1219.4
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
1219.2
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1208.0
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1207.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
1195.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1193.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1173.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1168.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1159.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1143.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1142.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1124.1
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1122.6
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1121.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
1108.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1078.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1068.4
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1067.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
1066.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1054.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
1038.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1033.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
1029.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
1022.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1019.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
1014.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1012.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
1004.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
1004.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
1003.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
1000.4
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
998.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
996.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
977.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
976.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
972.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
970.9
GTEX-P78B-1926-SM-3P616
40-49 years, female
965.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
962.8
GTEX-11I78-1926-SM-59878
50-59 years, female
962.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
953.8
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
940.3
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
938.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
934.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
915.5
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
912.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
911.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
905.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
904.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
899.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
891.8
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
886.2
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
882.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
880.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
856.2
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
855.2
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
853.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
852.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
848.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
846.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
844.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
840.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
832.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
821.9
GTEX-Q734-0726-SM-48TZP
40-49 years, female
821.8
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
815.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
813.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
810.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
809.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
807.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
796.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
784.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
779.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
757.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
754.5
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
747.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
730.4
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
723.0
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
717.9
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
712.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
688.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
680.4
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
653.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.