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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 283.9
Min RPKM: 129.5
Std RPKM: 32.2
Median RPKM: 183.9
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
283.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
271.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
262.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
247.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
247.0
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
246.7
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
246.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
245.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
240.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
240.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
237.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
234.6
GTEX-144GN-2126-SM-5O99D
50-59 years, male
234.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
232.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
226.4
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
222.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
221.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
219.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
218.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
218.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
218.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
216.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
216.0
GTEX-QCQG-0226-SM-48U28
50-59 years, female
215.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
213.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
210.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
210.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
208.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
208.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
207.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
206.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
205.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
204.5
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
203.3
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
201.4
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
201.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
199.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
198.7
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
198.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
197.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
197.0
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
195.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
194.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
193.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
192.6
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
189.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
189.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
188.5
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
186.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
186.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
186.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
183.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
183.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
183.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
182.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
181.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
180.6
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
180.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
179.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
179.1
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
178.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
177.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
176.9
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
175.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
175.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
175.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
175.6
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
174.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
173.6
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
173.5
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
172.1
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
171.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
169.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
168.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
168.2
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
168.1
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
168.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
166.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
165.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
164.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
163.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
162.1
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
161.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
161.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
161.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
158.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
157.5
GTEX-PX3G-0926-SM-48U12
20-29 years, female
156.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
156.7
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
154.2
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
153.2
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
153.2
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
153.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
149.3
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
148.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
146.6
GTEX-13111-0126-SM-5EGHO
50-59 years, male
146.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
146.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
145.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
144.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
141.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
137.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
136.8
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
129.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.