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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 683.4
Min RPKM: 240.1
Std RPKM: 104.1
Median RPKM: 366.6
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
683.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
673.1
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
653.2
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
629.3
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
624.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
621.7
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
601.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
597.9
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
587.0
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
578.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
560.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
557.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
545.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
535.0
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
526.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
515.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
512.3
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
497.7
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
489.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
482.1
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
471.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
468.8
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
466.3
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
463.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
457.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
414.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
413.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
411.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
409.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
407.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
405.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
404.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
404.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
404.0
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
395.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
389.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
388.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
387.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
384.6
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
384.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
380.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
378.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
376.7
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
376.6
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
370.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
368.0
GTEX-S32W-1226-SM-4AD67
50-59 years, female
368.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
367.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
366.6
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
366.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
365.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
364.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
363.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
362.6
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
359.5
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
359.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
355.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
354.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
351.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
349.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
348.2
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
347.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
343.3
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
340.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
339.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
335.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
333.3
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
332.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
332.6
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
330.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
330.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
330.6
GTEX-11I78-1926-SM-59878
50-59 years, female
328.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
323.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
320.5
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
318.4
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
313.2
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
310.1
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
309.7
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
306.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
304.9
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
304.2
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
301.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
300.8
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
297.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
296.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
289.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
289.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
289.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
288.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
287.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
285.2
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
281.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
277.9
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
264.5
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
262.3
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
240.1
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.