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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1654.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1671.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2823.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 550.8
Min RPKM: 120.1
Std RPKM: 56.2
Median RPKM: 206.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
550.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
420.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
369.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
366.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
361.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
357.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
351.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
340.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
337.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
314.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
313.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
305.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
304.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
303.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
302.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
302.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
299.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
295.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
295.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
294.7
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
291.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
290.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
288.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
282.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
274.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
274.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
271.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
270.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
270.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
269.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
267.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
263.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
262.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
259.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
259.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
259.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
259.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
257.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
256.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
254.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
254.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
253.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
252.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
252.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
248.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
247.1
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
247.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
245.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
245.7
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
243.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
243.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
242.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
242.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
241.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
240.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
240.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
239.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
238.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
238.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
237.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
236.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
236.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
236.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
236.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
235.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
235.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
234.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
232.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
231.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
231.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
230.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
230.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
230.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
229.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
229.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
229.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
229.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
228.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
228.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
227.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
226.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
226.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
225.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
225.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
224.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
224.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
224.0
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
223.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
222.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
220.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
220.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
219.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
217.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
217.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
215.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
215.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
213.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
213.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
212.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
212.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
211.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
210.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
210.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
209.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
208.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
207.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
206.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
206.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
204.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
204.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
203.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
202.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
201.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
201.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
200.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
200.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
197.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
197.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
196.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
196.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
196.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
194.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
194.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
194.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
193.3
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
192.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
192.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
192.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
191.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
191.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
190.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
190.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
189.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
189.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
189.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
188.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
188.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
187.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
187.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
187.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
186.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
186.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
186.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
185.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
184.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
183.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
182.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
182.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
181.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
181.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
180.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
179.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
179.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
179.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
178.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
178.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
178.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
178.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
177.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
176.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
176.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
176.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
175.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
175.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
174.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
174.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
173.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
173.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
173.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
173.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
172.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
171.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
171.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
171.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
171.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
170.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
170.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
169.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
168.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
167.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
167.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
166.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
165.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
165.2
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
164.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
162.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
162.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
161.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
161.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
159.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
159.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
159.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
159.0
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
158.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
158.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
158.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
157.3
GTEX-11EI6-0626-SM-5985T
60-69 years, male
157.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
154.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
151.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
149.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
148.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
148.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
148.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
148.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
143.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
140.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
138.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
138.4
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
137.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
136.5
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
133.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
130.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
120.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.