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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 306.0
Min RPKM: 15.6
Std RPKM: 63.9
Median RPKM: 118.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
306.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
279.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
276.4
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
270.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
259.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
242.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
240.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
236.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
235.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
221.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
220.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
217.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
205.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
197.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
196.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
195.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
189.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
188.5
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
187.1
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
183.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
183.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
182.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
180.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
177.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
176.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
176.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
173.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
165.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
163.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
159.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
157.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
156.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
156.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
151.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
151.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
149.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
147.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
141.2
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
140.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
138.5
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
137.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
134.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
134.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
134.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
134.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
133.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
133.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
133.5
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
130.5
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
130.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
129.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
126.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
125.0
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
121.9
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
121.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
120.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
120.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
119.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
118.8
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
118.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
115.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
114.5
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
114.3
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
113.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
112.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
111.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
110.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
108.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
108.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
103.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
103.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
101.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
101.1
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
100.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
99.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
97.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
96.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
96.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
95.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
94.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
91.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
89.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
89.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
87.7
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
87.5
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
84.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
82.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
82.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
80.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
79.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
74.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
72.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
71.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
63.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
62.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
58.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
52.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
48.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
48.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
46.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
45.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
43.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
43.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
42.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
39.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
38.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
38.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
36.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
35.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
31.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
30.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
30.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
29.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
26.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
21.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
20.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
15.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.