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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 190.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 116.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 116.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 331.6
Min RPKM: 50.2
Std RPKM: 43.0
Median RPKM: 95.0
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
331.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
260.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
250.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
240.3
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
228.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
210.6
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
210.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
201.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
198.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
196.3
GTEX-144GM-0926-SM-5O994
20-29 years, male
194.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
188.8
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
185.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
173.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
172.4
GTEX-X261-0626-SM-3NMD9
50-59 years, male
171.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
169.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
169.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
168.3
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
166.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
166.1
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
159.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
159.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
159.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
157.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
155.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
155.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
155.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
153.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
151.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
150.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
148.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
145.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
145.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
142.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
141.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
140.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
138.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
138.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
138.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
138.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
136.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
132.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
131.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
129.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
128.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
127.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
126.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
125.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
125.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
125.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
125.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
124.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
123.0
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
121.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
121.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
121.1
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
121.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
120.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
119.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
117.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
117.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
116.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
114.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
114.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
114.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
113.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
113.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
113.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
112.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
111.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
111.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
110.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
109.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
109.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
108.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
106.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
106.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
106.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
105.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
104.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
103.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
103.5
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
103.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
102.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
101.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
101.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
101.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
101.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
101.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
100.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
100.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
100.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
100.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
100.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
100.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
100.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
99.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
98.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
98.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
97.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
97.0
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
96.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
96.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
95.4
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
95.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
95.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
94.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
94.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
94.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
93.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
93.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
92.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
91.7
GTEX-R55D-0826-SM-48FEA
50-59 years, male
91.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
91.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
91.0
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
90.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
90.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
90.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
90.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
89.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
89.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
89.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
89.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
89.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
88.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
88.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
87.7
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
87.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
86.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
86.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
86.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
86.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
86.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
86.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
85.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
82.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
82.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
82.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
82.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
82.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
82.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
82.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
80.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
80.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
80.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
80.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
79.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
79.6
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
79.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
79.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
78.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
78.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
78.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
77.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
77.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
76.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
76.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
76.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
75.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
75.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
75.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
75.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
74.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
74.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
74.5
GTEX-111YS-1926-SM-5GICC
60-69 years, male
73.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
73.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
73.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
73.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
73.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
72.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
72.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
72.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
72.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
71.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
70.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
70.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
70.4
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
70.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
69.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
69.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
67.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
67.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
66.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
65.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
64.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
64.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
64.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
63.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
63.3
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
62.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
61.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
61.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
61.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
60.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
60.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
59.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
59.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
58.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
58.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
57.4
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
56.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
55.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
55.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
53.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
52.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
51.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
51.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
51.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
51.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
51.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
50.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.