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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 853.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 299.7
Min RPKM: 83.7
Std RPKM: 32.7
Median RPKM: 173.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
299.7
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
277.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
233.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
219.5
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
216.8
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
215.4
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
208.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
207.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
207.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
206.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
203.4
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
203.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
202.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
202.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
202.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
201.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
201.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
200.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
198.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
194.9
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
193.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
193.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
193.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
193.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
192.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
191.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
191.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
191.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
190.7
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
190.2
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
188.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
187.7
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
187.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
186.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
186.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
185.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
184.5
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
183.6
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
183.4
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
183.1
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
182.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
182.6
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
181.1
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
180.8
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
180.4
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
180.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
179.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
177.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
177.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
176.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
176.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
176.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
176.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
176.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
175.1
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
174.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
174.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
173.5
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
173.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
172.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
172.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
171.4
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
171.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
171.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
170.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
170.6
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
170.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
169.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
168.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
168.1
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
167.5
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
165.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
164.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
164.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
164.7
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
163.6
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
163.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
163.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
161.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
161.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
160.9
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
160.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
159.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
157.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
157.7
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
157.0
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
155.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
153.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
151.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
151.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
149.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
149.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
147.7
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
147.1
GTEX-145MF-2726-SM-5O995
50-59 years, male
145.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
142.1
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
140.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
136.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
136.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
133.1
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
133.0
GTEX-11GSP-3226-SM-5986O
60-69 years, female
130.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
124.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
122.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
120.0
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
119.4
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
114.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
114.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
109.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
108.7
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
106.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
94.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
90.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
83.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 209.2
Samples: 108
Max RPKM: 315.8
Min RPKM: 83.4
Std RPKM: 44.4
Median RPKM: 220.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
315.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
302.3
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
296.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
285.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
280.1
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
276.0
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
275.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
271.0
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
267.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
265.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
256.2
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
253.9
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
251.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
250.9
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
250.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
250.1
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
249.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
246.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
243.2
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
242.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
241.5
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
240.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
239.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
238.9
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
237.7
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
236.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
236.7
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
236.5
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
236.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
235.2
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
234.6
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
233.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
233.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
232.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
232.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
228.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
226.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
226.1
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
225.3
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
225.0
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
225.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
224.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
223.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
223.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
223.6
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
222.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
222.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
222.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
221.7
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
221.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
221.3
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
220.8
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
220.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
220.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
220.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
218.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
213.6
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
213.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
212.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
211.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
208.4
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
207.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
206.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
205.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
204.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
203.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
202.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
202.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
201.7
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
200.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
198.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
197.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
195.3
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
194.8
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
194.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
193.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
191.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
188.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
187.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
186.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
183.0
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
182.9
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
181.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
181.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
180.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
179.1
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
178.9
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
175.4
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
174.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
173.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
173.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
168.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
166.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
152.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
149.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
148.9
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
142.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
142.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
140.5
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
138.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
138.0
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
129.8
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
123.6
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
119.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
116.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
103.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
84.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
83.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.