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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1345.8
Min RPKM: 164.8
Std RPKM: 207.0
Median RPKM: 451.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1345.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
1340.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
1161.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
1011.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
972.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
847.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
839.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
819.8
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
805.0
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
801.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
792.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
786.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
785.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
764.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
763.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
747.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
740.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
734.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
725.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
723.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
716.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
700.3
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
698.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
691.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
683.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
627.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
625.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
619.3
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
609.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
598.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
595.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
594.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
586.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
567.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
566.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
553.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
553.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
545.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
540.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
538.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
536.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
536.1
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
526.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
523.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
520.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
514.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
509.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
509.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
505.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
504.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
499.6
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
497.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
478.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
478.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
463.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
462.9
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
455.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
454.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
451.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
451.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
450.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
450.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
447.3
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
444.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
443.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
443.0
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
437.9
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
437.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
437.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
432.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
431.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
425.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
424.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
423.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
422.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
412.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
412.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
403.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
403.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
402.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
402.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
400.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
397.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
395.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
394.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
394.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
388.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
387.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
387.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
386.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
386.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
375.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
375.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
374.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
374.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
367.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
357.8
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
357.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
356.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
349.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
345.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
343.1
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
340.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
332.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
330.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
322.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
320.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
316.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
305.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
299.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
267.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
259.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
244.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
243.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
236.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
228.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
164.8
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.