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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 3681.2
Min RPKM: 614.6
Std RPKM: 530.4
Median RPKM: 1291.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
3681.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
3038.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2672.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
2549.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
2381.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2369.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
2356.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
2115.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
2115.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
2073.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
2027.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1980.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
1913.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
1871.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
1780.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
1778.3
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
1771.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1760.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1745.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
1716.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1707.3
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
1697.1
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1687.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1639.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1566.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
1512.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
1503.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1503.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
1471.5
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1469.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1468.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1445.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
1425.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1412.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
1403.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1389.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1367.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1366.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1350.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
1348.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1331.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
1330.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1329.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1326.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
1322.6
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1308.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1297.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1285.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1277.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1265.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
1249.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
1228.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1224.8
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1192.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1183.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1179.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1176.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
1174.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1139.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
1138.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1138.0
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1136.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1129.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1108.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1105.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1100.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1095.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1069.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
1068.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1063.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
1047.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
1035.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1005.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
998.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
995.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
963.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
958.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
947.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
936.3
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
932.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
910.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
856.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
851.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
849.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
804.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
791.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
766.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
744.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
737.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
730.7
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
714.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
680.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
654.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
614.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.