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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 4887.7
Min RPKM: 713.1
Std RPKM: 663.0
Median RPKM: 1415.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
4887.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
3582.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
3535.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
3459.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
2838.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
2834.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
2809.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
2805.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
2769.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
2725.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
2609.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
2592.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
2409.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
2341.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
2327.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
2252.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
2198.3
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
2141.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
2140.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
2129.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
2102.5
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
2094.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
2074.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
2055.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
2048.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
1925.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
1918.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
1842.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
1842.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
1815.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
1809.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
1803.2
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
1781.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
1774.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
1757.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
1719.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
1713.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
1712.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
1703.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
1695.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
1687.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
1648.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
1642.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
1638.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
1627.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
1622.4
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
1621.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
1616.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
1593.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
1584.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
1528.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
1525.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
1515.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
1513.5
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
1491.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
1486.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
1476.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
1430.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
1415.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
1414.3
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
1410.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
1393.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
1392.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
1388.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
1388.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
1371.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
1368.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
1366.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
1351.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
1331.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
1330.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
1324.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1266.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
1265.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
1259.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
1247.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
1244.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
1241.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
1236.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
1235.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1234.7
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
1218.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
1213.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
1207.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
1177.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
1164.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
1163.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
1153.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
1146.8
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
1144.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
1144.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
1124.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
1116.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
1105.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
1102.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
1097.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
1088.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
1080.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
1067.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
1061.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
1056.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
1050.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
1024.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
996.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
988.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
985.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
973.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
964.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
948.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
946.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
946.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
912.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
899.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
865.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
809.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
784.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
713.1
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.