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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 4488.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2688.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 835.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 13131.7
Min RPKM: 698.1
Std RPKM: 1619.0
Median RPKM: 2090.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
13131.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
9375.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
9252.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
8383.3
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
6982.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
6617.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
5949.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
5937.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
5832.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
5733.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
5659.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
5606.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
5082.3
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
4984.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
4968.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
4825.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
4784.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
4718.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
4657.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
4619.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
4614.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
4578.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
4533.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
4492.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
4406.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
4314.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
4280.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
4255.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
4230.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
4052.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
3969.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
3882.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
3817.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
3791.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
3781.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
3719.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
3702.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
3683.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
3590.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
3570.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
3555.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
3476.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
3472.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
3451.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
3435.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
3432.8
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
3406.3
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
3400.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
3350.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
3328.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
3320.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
3314.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
3289.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
3249.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
3087.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
3050.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
3005.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
2991.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
2990.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
2988.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
2961.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
2937.4
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
2935.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
2932.8
GTEX-11OF3-1926-SM-59889
60-69 years, male
2918.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
2885.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
2832.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
2826.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
2791.9
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
2779.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
2758.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
2757.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
2754.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
2747.4
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
2714.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
2714.1
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
2707.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
2652.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
2629.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
2591.8
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
2547.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
2530.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
2462.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
2433.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
2425.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
2413.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
2397.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
2381.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
2352.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
2349.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
2344.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
2338.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
2327.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
2323.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
2314.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
2310.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2288.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
2288.4
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
2229.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
2213.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
2199.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
2159.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
2142.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
2128.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
2126.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
2110.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
2105.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
2075.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
2057.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
2057.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
2056.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
2041.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
2031.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
2023.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
2018.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
2012.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
2012.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
2008.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
2003.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
1989.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
1985.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
1977.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
1977.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
1971.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
1960.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1959.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1947.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
1940.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1930.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
1910.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
1903.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
1875.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
1872.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
1844.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
1819.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1818.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
1813.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
1804.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
1797.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
1784.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
1767.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
1765.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1762.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
1734.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
1722.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
1722.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
1719.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1705.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
1703.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1684.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
1680.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
1677.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
1677.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
1658.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
1625.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
1623.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
1595.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
1589.4
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
1574.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
1562.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
1535.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
1533.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
1532.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
1532.2
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
1527.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
1511.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
1507.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
1504.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
1497.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
1490.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
1480.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
1469.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1449.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
1446.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1423.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
1406.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
1395.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
1394.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
1384.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
1380.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
1374.0
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1371.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1369.7
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
1366.5
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
1301.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
1291.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
1285.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
1273.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
1265.0
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1251.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
1240.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1229.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
1199.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
1160.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1158.8
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
1151.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1139.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
1130.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
1111.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
1108.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
1105.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
1103.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1098.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1089.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
1066.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1065.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1058.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
986.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
977.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
892.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
879.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
833.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
829.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
698.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.