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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 260.0
Min RPKM: 9.4
Std RPKM: 47.6
Median RPKM: 57.8
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
260.0
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
212.8
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
173.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
169.0
GTEX-13111-0126-SM-5EGHO
50-59 years, male
168.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
162.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
162.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
154.0
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
149.6
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
138.0
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
133.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
129.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
126.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
123.7
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
119.9
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
117.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
116.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
115.2
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
112.5
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
109.9
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
109.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
108.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
104.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
101.8
GTEX-QLQW-0126-SM-447BK
30-39 years, male
95.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
95.4
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
93.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
91.1
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
88.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
87.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
87.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
86.4
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
84.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
82.9
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
82.8
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
79.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
79.8
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
77.1
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
76.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
71.5
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
71.3
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
69.5
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
69.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
69.2
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
65.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
63.9
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
63.9
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
63.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
62.0
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
61.9
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
60.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
59.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
55.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
54.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
54.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
54.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
53.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
53.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
53.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
51.1
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
51.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
50.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
50.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
49.0
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
48.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
48.1
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
47.0
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
45.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
45.4
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
45.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
43.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
42.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
40.2
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
39.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
37.8
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
36.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
34.4
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
34.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
32.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
32.7
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
32.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
31.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
30.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
29.0
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
28.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
27.1
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
26.9
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
24.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
24.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
24.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
21.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
20.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
19.6
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
18.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
17.5
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
16.6
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
15.6
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
15.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
15.1
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
10.7
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
10.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
10.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
9.8
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
9.4
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.