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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 532.4
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 471.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 709.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 407.5
Min RPKM: 86.1
Std RPKM: 54.1
Median RPKM: 194.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
407.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
397.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
348.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
341.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
339.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
331.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
329.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
322.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
317.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
314.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
310.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
309.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
305.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
297.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
293.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
290.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
288.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
288.4
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
287.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
284.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
279.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
276.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
275.3
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
274.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
271.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
271.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
266.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
265.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
265.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
262.6
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
258.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
257.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
257.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
254.8
GTEX-111YS-1926-SM-5GICC
60-69 years, male
252.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
252.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
250.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
249.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
248.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
247.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
245.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
244.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
244.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
243.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
242.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
240.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
240.4
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
239.9
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
239.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
238.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
238.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
237.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
232.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
231.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
227.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
227.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
226.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
225.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
225.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
224.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
222.9
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
222.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
222.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
222.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
221.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
220.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
220.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
218.9
GTEX-TML8-1226-SM-32QON
40-49 years, female
218.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
218.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
217.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
217.5
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
216.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
215.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
215.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
214.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
214.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
213.6
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
213.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
212.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
212.3
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
211.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
211.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
209.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
207.3
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
207.2
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
206.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
205.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
205.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
205.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
205.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
205.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
205.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
204.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
203.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
203.8
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
202.6
GTEX-13113-1726-SM-5GCOO
60-69 years, female
200.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
199.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
199.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
198.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
197.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
197.8
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
197.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
196.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
195.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
194.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
193.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
193.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
193.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
192.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
191.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
190.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
190.8
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
190.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
189.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
189.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
188.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
188.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
188.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
187.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
187.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
185.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
185.7
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
184.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
183.1
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
182.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
182.5
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
182.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
181.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
181.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
180.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
179.6
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
179.1
GTEX-QEL4-2126-SM-447AE
50-59 years, male
178.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
178.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
178.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
178.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
177.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
177.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
176.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
176.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
176.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
175.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
174.7
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
172.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
172.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
170.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
170.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
169.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
169.0
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
168.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
168.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
168.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
167.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
167.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
167.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
166.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
166.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
165.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
165.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
165.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
164.1
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
163.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
162.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
162.4
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
162.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
161.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
161.0
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
160.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
160.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
159.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
158.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
157.9
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
156.7
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
156.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
154.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
154.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
153.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
152.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
152.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
150.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
149.8
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
148.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
147.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
145.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
145.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
144.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
143.9
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
143.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
142.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
141.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
141.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
140.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
138.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
137.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
137.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
137.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
135.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
133.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
133.4
GTEX-QVJO-1826-SM-447C9
60-69 years, female
132.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
132.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
131.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
130.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
129.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
129.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
127.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
124.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
124.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
124.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
122.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
121.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
86.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.