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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 351.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 402.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 193
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 441.5
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 468.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 331
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 380.6
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 410.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 365.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 244.1
Min RPKM: 52.1
Std RPKM: 42.4
Median RPKM: 149.7
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
244.1
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
242.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
228.6
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
228.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
227.0
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
225.5
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
222.3
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
220.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
217.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
215.9
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
213.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
211.9
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
211.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
211.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
211.3
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
209.3
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
209.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
209.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
206.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
202.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
202.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
201.2
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
201.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
199.9
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
199.6
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
199.5
GTEX-Y111-2426-SM-4TT23
50-59 years, male
198.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
198.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
195.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
195.4
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
194.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
193.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
193.5
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
192.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
191.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
188.2
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
186.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
186.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
185.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
184.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
184.2
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
183.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
181.4
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
181.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
181.0
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
180.6
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
179.1
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
178.7
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
178.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
174.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
173.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
173.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
173.7
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
172.0
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
171.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
170.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
168.4
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
168.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
168.2
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
167.5
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
167.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
167.1
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
166.3
GTEX-11OF3-1826-SM-5987N
60-69 years, male
166.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
163.1
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
162.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
161.9
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
161.5
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
161.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
160.8
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
160.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
160.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
159.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
157.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
156.9
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
156.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
155.7
GTEX-S95S-1126-SM-4B64E
60-69 years, male
155.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
154.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
154.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
153.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
152.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
151.2
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
150.9
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
150.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
149.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
149.6
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
148.7
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
148.3
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
148.1
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
147.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
145.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
145.5
GTEX-V955-1926-SM-4KL1L
60-69 years, male
145.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
143.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
142.4
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
142.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
142.0
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
141.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
141.1
GTEX-R55C-1426-SM-48FED
40-49 years, male
140.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
139.4
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
138.8
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
138.2
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
138.1
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
137.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
137.2
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
137.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
136.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
135.5
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
135.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
134.4
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
133.1
GTEX-13111-1526-SM-5EGJX
50-59 years, male
132.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
131.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
130.3
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
130.2
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
129.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
129.3
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
129.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
128.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
128.0
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
127.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
127.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
126.6
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
123.5
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
122.8
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
122.0
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
121.5
GTEX-X261-2326-SM-4PQYU
50-59 years, male
121.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
119.6
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
119.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
116.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
114.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
113.8
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
112.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
110.6
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
110.3
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
109.9
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
109.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
108.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
108.1
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
107.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
107.4
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
107.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
107.3
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
106.1
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
105.7
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
104.5
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
102.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
100.0
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
99.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
99.2
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
94.2
GTEX-XPT6-1626-SM-4B655
20-29 years, male
91.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
91.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
91.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
91.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
89.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
87.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
85.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
85.0
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
84.3
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
76.5
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
74.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
64.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
62.5
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
62.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
60.9
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
60.1
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
54.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
52.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.