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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 261.5
Min RPKM: 3.6
Std RPKM: 39.3
Median RPKM: 45.4
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
261.5
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
175.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
138.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
131.7
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
126.3
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
125.5
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
115.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
114.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
102.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
102.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
99.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
98.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
92.7
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
87.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
86.3
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
85.4
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
83.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
79.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
78.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
76.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
75.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
74.8
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
68.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
67.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
67.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
66.8
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
65.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
65.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
65.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
64.5
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
63.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
60.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
58.6
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
58.5
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
58.4
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
58.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
56.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
56.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
53.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
53.1
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
52.2
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
50.6
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
49.4
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
49.1
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
48.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
47.7
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
47.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
47.0
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
43.9
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
43.8
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
43.1
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
42.7
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
42.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
40.9
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
39.1
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
38.4
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
37.5
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
36.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
35.4
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
34.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
33.6
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
33.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
33.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
32.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
32.7
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
32.1
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
31.9
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
31.9
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
31.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
29.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
28.8
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
27.7
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
27.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
27.2
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
27.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
26.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
25.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
24.8
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
23.4
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
22.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
21.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
21.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
21.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
19.4
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
17.8
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
17.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
17.2
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
15.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
12.2
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
12.0
GTEX-S341-1226-SM-4AD5S
40-49 years, female
9.5
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
9.2
GTEX-11I78-2026-SM-5987C
50-59 years, female
8.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
8.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
4.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
3.6
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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