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COL16A1
COLON - Expression summary
RNA expressioni
HPA:15.6TPM
GTEx:31.1RPKM
FANTOM5:24.7Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 15.6
overview Male, age 54 Sample 1
TPM: 17.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 9.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 15.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 18.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 9.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 23.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 5.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 17.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 18.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 28.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 31.1
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 43.8
Samples: 149

Max RPKM: 102.7
Min RPKM: 10.6
Std RPKM: 21.3
Median RPKM: 38.6
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 102.7
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 92.3
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 92.1
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 91.4
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 88.3
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 83.1
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 83.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 82.1
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 81.1
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 78.5
Show all
Colon - Transverse
RPKM: 21.5
Samples: 196

Max RPKM: 87.1
Min RPKM: 2.9
Std RPKM: 17.5
Median RPKM: 15.2
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 87.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 75.9
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 73.2
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 73.0
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 71.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 65.1
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 64.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 63.5
GTEX-11GSP-1626-SM-5986N 60-69 years, female 60.8
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 59.7
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 24.7
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 21.3
FF:10014-101C5 62,83,84 years, mixed 24.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.