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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 140.7
Min RPKM: 49.9
Std RPKM: 19.9
Median RPKM: 102.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
140.7
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
135.9
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
134.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
134.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
133.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
133.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
132.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
131.9
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
129.7
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
129.6
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
128.4
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
127.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
125.6
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
123.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
121.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
119.2
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
118.9
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
118.5
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
118.1
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
117.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
117.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
116.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
114.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
114.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
113.8
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
113.8
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
112.9
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
112.0
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
111.6
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
111.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
111.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
111.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
111.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
109.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
109.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
107.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
107.9
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
107.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
107.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
106.1
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
105.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
105.3
GTEX-P78B-1926-SM-3P616
40-49 years, female
105.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
104.0
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
104.0
GTEX-11I78-1926-SM-59878
50-59 years, female
103.6
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
103.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
103.4
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
102.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
101.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
100.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
100.5
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
100.4
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
100.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
100.1
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
99.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
99.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
99.5
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
98.0
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
97.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
96.7
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
95.3
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
94.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
94.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
94.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
94.1
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
91.8
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
91.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
90.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
89.5
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
89.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
88.8
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
87.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
86.5
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
86.3
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
85.6
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
84.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
84.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
81.9
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
79.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
77.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
77.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
76.2
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
75.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
75.3
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
74.9
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
74.7
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
74.0
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
72.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
71.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
68.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
68.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
67.1
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
65.7
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
59.4
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
53.9
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
49.9
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.