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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 251.5
Min RPKM: 36.5
Std RPKM: 52.0
Median RPKM: 156.8
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
251.5
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
247.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
225.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
224.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
222.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
220.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
219.8
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
219.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
218.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
215.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
211.1
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
210.6
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
209.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
208.8
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
208.0
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
205.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
201.7
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
200.5
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
193.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
192.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
191.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
191.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
189.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
189.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
186.4
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
185.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
183.9
GTEX-QLQW-0126-SM-447BK
30-39 years, male
182.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
182.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
179.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
177.2
GTEX-QCQG-0226-SM-48U28
50-59 years, female
177.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
173.7
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
173.7
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
172.5
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
171.8
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
169.4
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
167.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
165.9
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
165.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
165.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
164.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
163.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
163.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
163.1
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
162.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
161.5
GTEX-QV31-0126-SM-447BP
30-39 years, male
160.6
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
159.5
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
158.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
157.9
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
157.1
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
156.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
154.2
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
153.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
152.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
150.0
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
149.5
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
148.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
148.9
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
147.1
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
146.4
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
145.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
145.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
144.3
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
144.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
141.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
138.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
137.5
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
137.4
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
121.2
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
121.1
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
120.2
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
119.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
118.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
111.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
109.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
105.9
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
103.4
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
103.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
98.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
97.4
GTEX-13111-0126-SM-5EGHO
50-59 years, male
97.2
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
96.4
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
96.0
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
94.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
94.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
82.9
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
77.7
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
73.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
68.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
67.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
67.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
63.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
61.8
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
58.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
54.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
54.6
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
53.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
53.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
53.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
48.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
48.0
GTEX-Q734-0226-SM-48U1A
40-49 years, female
36.5
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.