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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 391.1
Min RPKM: 150.6
Std RPKM: 55.5
Median RPKM: 245.8
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
391.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
387.7
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
370.0
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
367.7
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
362.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
359.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
356.9
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
356.3
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
354.6
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
351.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
345.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
340.3
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
339.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
325.5
GTEX-R55G-0226-SM-48FEI
40-49 years, female
323.1
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
320.4
GTEX-QV31-0126-SM-447BP
30-39 years, male
319.4
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
318.4
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
318.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
296.6
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
294.0
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
291.6
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
289.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
285.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
285.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
283.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
283.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
282.8
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
282.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
278.1
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
277.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
276.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
276.4
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
275.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
273.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
267.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
263.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
263.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
261.8
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
261.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
261.4
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
259.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
257.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
256.7
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
256.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
254.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
253.0
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
251.7
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
251.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
247.9
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
246.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
246.0
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
245.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
242.9
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
242.8
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
242.7
GTEX-X585-1826-SM-4QAS3
50-59 years, male
242.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
242.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
240.8
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
240.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
238.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
238.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
238.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
234.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
231.2
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
230.1
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
229.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
228.4
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
226.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
225.9
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
223.2
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
222.4
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
220.5
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
219.8
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
218.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
218.2
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
217.6
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
217.4
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
214.3
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
212.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
210.6
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
210.0
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
206.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
205.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
203.8
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
200.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
198.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
198.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
197.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
197.1
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
195.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
195.5
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
195.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
191.3
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
187.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
186.8
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
184.5
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
179.0
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
178.9
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
166.1
GTEX-Q734-0226-SM-48U1A
40-49 years, female
166.0
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
163.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
151.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
150.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.