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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 994.8
Min RPKM: 352.4
Std RPKM: 134.6
Median RPKM: 552.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
994.8
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
920.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
881.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
854.7
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
834.9
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
831.0
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
822.6
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
819.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
809.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
757.7
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
748.3
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
727.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
717.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
716.8
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
716.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
715.7
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
709.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
699.9
GTEX-RU72-2226-SM-46MUE
50-59 years, female
683.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
680.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
667.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
664.5
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
656.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
654.7
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
653.9
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
644.7
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
640.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
635.1
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
630.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
621.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
617.6
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
615.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
606.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
602.8
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
598.5
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
595.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
591.7
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
591.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
580.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
578.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
576.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
572.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
563.6
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
562.9
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
560.7
GTEX-P78B-1926-SM-3P616
40-49 years, female
559.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
553.6
GTEX-11I78-1926-SM-59878
50-59 years, female
553.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
552.9
GTEX-QCQG-1426-SM-48U22
50-59 years, female
547.3
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
542.3
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
540.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
534.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
529.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
528.8
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
527.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
527.0
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
525.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
524.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
520.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
512.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
509.0
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
508.5
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
508.1
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
507.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
506.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
506.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
494.6
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
492.6
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
490.4
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
488.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
483.7
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
478.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
473.1
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
469.4
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
468.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
462.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
456.2
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
453.0
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
450.7
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
449.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
434.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
434.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
426.3
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
419.9
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
419.6
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
417.1
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
415.3
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
413.3
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
399.6
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
395.5
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
389.5
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
385.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
382.5
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
370.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
367.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
352.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.