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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1186.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 971.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 1362.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1152.1
Min RPKM: 116.2
Std RPKM: 119.9
Median RPKM: 248.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1152.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
748.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
710.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
703.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
637.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
537.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
503.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
502.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
484.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
479.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
473.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
462.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
461.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
460.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
454.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
448.4
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
438.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
438.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
431.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
427.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
423.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
421.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
419.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
416.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
410.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
409.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
399.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
395.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
378.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
374.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
371.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
370.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
367.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
366.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
357.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
348.1
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
343.7
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
339.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
338.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
336.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
333.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
333.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
332.8
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
328.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
327.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
327.9
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
325.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
323.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
322.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
319.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
319.1
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
317.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
316.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
315.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
315.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
314.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
311.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
311.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
306.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
305.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
303.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
302.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
301.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
300.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
299.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
299.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
299.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
299.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
298.8
GTEX-RU72-0626-SM-46MUI
50-59 years, female
295.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
293.8
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
292.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
289.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
289.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
288.7
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
287.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
287.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
286.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
283.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
281.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
278.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
276.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
276.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
275.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
275.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
274.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
272.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
265.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
264.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
264.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
260.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
259.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
258.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
258.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
258.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
258.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
256.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
254.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
254.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
252.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
252.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
252.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
252.0
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
251.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
251.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
250.8
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
249.9
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
247.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
246.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
246.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
246.2
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
246.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
245.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
245.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
244.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
244.3
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
244.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
243.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
241.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
241.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
241.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
240.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
238.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
237.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
237.5
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
237.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
237.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
236.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
236.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
234.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
234.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
233.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
233.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
230.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
226.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
226.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
226.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
225.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
224.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
224.5
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
222.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
220.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
220.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
219.1
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
218.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
217.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
215.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
214.3
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
212.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
211.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
210.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
209.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
208.2
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
206.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
204.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
204.4
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
204.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
203.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
202.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
200.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
199.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
199.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
198.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
198.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
198.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
197.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
197.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
197.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
196.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
196.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
194.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
192.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
192.5
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
190.6
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
190.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
189.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
189.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
189.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
187.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
187.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
186.4
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
186.0
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
184.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
184.5
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
183.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
183.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
180.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
179.3
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
174.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
172.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
171.5
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
169.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
169.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
166.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
165.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
164.9
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
162.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
161.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
160.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
159.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
157.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
157.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
154.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
154.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
153.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
147.7
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
146.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
142.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
138.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
135.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
129.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
123.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
120.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
116.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.