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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 33.2
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 83.9
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 43.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 61
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 206
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 244.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 44.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 100.2
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 732.8
Min RPKM: 6.0
Std RPKM: 125.5
Median RPKM: 140.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
732.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
493.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
489.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
478.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
476.8
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
449.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
437.1
GTEX-11GSP-0626-SM-5986T
60-69 years, female
434.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
408.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
393.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
375.9
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
371.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
360.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
357.7
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
354.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
342.1
GTEX-RN64-1826-SM-48FDV
50-59 years, male
298.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
277.4
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
277.0
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
262.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
251.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
250.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
238.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
235.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
231.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
230.1
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
229.3
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
227.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
222.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
220.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
219.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
218.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
215.6
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
214.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
211.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
210.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
205.5
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
198.9
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
195.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
193.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
187.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
183.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
183.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
173.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
172.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
171.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
168.8
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
167.5
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
167.0
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
157.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
156.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
151.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
151.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
150.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
147.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
146.2
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
145.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
142.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
142.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
140.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
139.6
GTEX-S33H-1626-SM-4AD68
30-39 years, male
136.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
136.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
128.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
128.6
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
127.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
127.0
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
126.5
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
126.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
121.9
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
111.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
111.0
GTEX-R53T-0326-SM-48FEC
50-59 years, female
110.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
110.0
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
108.5
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
108.5
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
106.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
103.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
99.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
99.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
98.2
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
95.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
94.2
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
94.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
93.9
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
92.8
GTEX-P78B-1326-SM-3P611
40-49 years, female
91.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
91.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
88.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
87.6
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
87.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
81.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
79.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
77.7
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
76.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
75.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
75.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
71.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
70.8
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
70.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
69.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
68.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
62.8
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
61.3
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
60.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
59.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
59.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
58.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
53.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
46.7
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
41.1
GTEX-13113-1326-SM-5GCOI
60-69 years, female
38.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
30.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
29.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
29.3
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
24.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
23.7
GTEX-11ZUS-2526-SM-59872
30-39 years, male
20.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
6.0
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
