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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 747.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 921.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 615.2
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 855.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 886.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 633.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 1541.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 939.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 1126.4
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 677.3
Min RPKM: 234.8
Std RPKM: 68.6
Median RPKM: 394.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
677.3
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
664.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
593.9
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
576.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
559.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
538.3
GTEX-QLQW-1026-SM-447A9
30-39 years, male
522.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
506.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
501.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
501.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
500.2
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
497.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
496.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
490.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
484.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
480.2
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
476.1
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
474.2
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
471.6
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
470.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
470.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
457.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
455.2
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
454.7
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
453.5
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
453.0
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
452.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
452.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
450.3
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
448.2
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
447.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
443.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
442.6
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
441.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
439.0
GTEX-Y111-2426-SM-4TT23
50-59 years, male
438.9
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
438.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
438.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
438.1
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
434.6
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
434.2
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
433.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
432.9
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
429.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
429.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
428.8
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
427.4
GTEX-117XS-2026-SM-5GID1
60-69 years, male
426.6
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
425.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
425.0
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
425.0
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
423.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
423.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
423.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
422.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
421.9
GTEX-13112-0226-SM-5P9IV
50-59 years, male
421.1
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
420.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
419.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
419.8
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
419.5
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
418.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
416.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
416.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
416.1
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
414.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
414.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
413.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
412.4
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
410.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
410.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
410.3
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
406.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
406.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
405.2
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
404.8
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
404.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
400.6
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
397.8
GTEX-V955-1926-SM-4KL1L
60-69 years, male
397.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
397.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
396.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
396.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
396.2
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
395.6
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
395.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
393.6
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
392.4
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
392.1
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
392.1
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
391.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
391.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
391.0
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
389.5
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
388.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
387.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
385.7
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
385.6
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
383.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
383.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
381.9
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
381.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
381.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
378.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
378.0
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
377.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
377.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
376.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
374.9
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
373.9
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
372.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
369.9
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
369.8
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
368.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
365.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
363.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
362.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
360.2
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
359.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
358.6
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
357.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
356.5
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
355.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
355.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
355.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
353.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
352.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
352.1
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
351.4
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
351.2
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
349.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
348.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
347.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
347.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
347.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
343.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
339.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
339.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
339.1
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
338.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
338.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
338.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
337.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
336.4
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
334.4
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
333.5
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
331.9
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
330.4
GTEX-RN64-2326-SM-48FDW
50-59 years, male
329.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
326.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
326.3
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
325.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
325.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
324.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
320.8
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
320.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
319.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
315.1
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
314.1
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
303.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
300.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
295.4
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
294.1
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
293.5
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
292.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
283.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
282.7
GTEX-12696-0226-SM-5EGL3
60-69 years, male
279.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
271.3
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
255.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
238.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
234.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.