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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 908.9
Min RPKM: 59.3
Std RPKM: 164.5
Median RPKM: 255.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
908.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
840.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
706.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
686.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
686.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
553.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
518.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
517.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
489.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
488.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
483.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
476.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
456.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
456.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
452.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
435.8
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
429.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
428.9
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
416.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
413.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
410.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
366.9
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
366.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
355.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
349.8
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
348.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
344.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
338.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
335.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
329.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
319.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
319.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
312.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
312.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
307.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
296.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
296.1
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
288.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
286.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
272.9
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
268.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
265.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
263.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
262.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
261.8
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
259.6
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
256.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
254.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
251.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
249.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
247.8
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
243.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
237.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
234.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
230.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
228.8
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
226.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
224.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
223.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
210.1
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
206.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
205.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
202.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
201.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
201.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
201.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
194.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
193.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
186.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
180.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
179.5
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
172.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
171.7
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
169.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
168.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
162.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
159.6
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
157.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
149.4
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
143.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
137.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
132.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
109.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
109.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
98.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
97.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
97.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
94.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
94.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
90.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
83.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
74.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
71.1
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
59.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.