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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 984.1
Min RPKM: 76.4
Std RPKM: 154.6
Median RPKM: 265.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
984.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
860.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
727.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
707.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
693.8
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
660.6
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
652.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
595.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
577.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
500.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
491.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
439.1
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
436.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
431.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
421.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
408.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
404.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
397.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
375.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
370.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
360.7
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
359.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
352.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
349.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
348.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
346.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
344.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
341.7
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
335.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
335.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
335.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
333.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
327.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
326.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
322.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
322.3
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
318.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
318.2
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
318.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
317.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
306.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
306.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
294.6
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
294.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
286.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
285.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
285.6
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
281.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
281.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
280.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
279.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
278.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
275.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
271.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
269.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
269.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
268.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
266.8
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
265.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
261.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
260.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
254.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
250.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
249.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
249.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
246.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
246.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
244.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
244.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
240.8
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
236.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
235.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
229.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
228.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
223.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
221.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
218.3
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
217.2
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
217.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
215.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
215.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
211.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
209.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
208.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
204.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
199.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
196.8
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
196.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
195.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
189.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
189.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
188.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
188.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
188.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
187.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
181.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
181.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
178.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
175.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
173.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
162.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
159.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
159.3
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
153.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
153.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
125.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
125.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
124.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
119.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
118.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
112.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
111.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
110.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
89.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
84.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
77.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
76.4
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.