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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 560.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 285.4
Min RPKM: 20.5
Std RPKM: 64.8
Median RPKM: 130.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
285.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
283.8
GTEX-144FL-3026-SM-5O99C
50-59 years, male
282.4
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
275.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
265.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
264.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
263.8
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
256.9
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
252.6
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
246.1
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
244.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
243.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
236.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
233.1
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
226.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
222.3
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
218.1
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
212.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
203.8
GTEX-1128S-2726-SM-5H12C
60-69 years, female
200.9
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
198.5
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
193.9
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
193.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
191.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
188.2
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
187.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
184.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
183.2
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
181.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
175.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
174.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
172.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
167.8
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
167.2
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
162.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
161.5
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
160.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
159.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
157.9
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
157.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
154.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
153.0
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
152.8
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
152.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
151.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
150.2
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
149.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
147.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
145.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
143.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
143.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
142.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
138.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
137.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
135.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
134.8
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
133.2
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
128.6
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
128.5
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
126.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
126.6
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
124.5
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
123.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
122.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
118.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
118.2
GTEX-X585-3026-SM-46MWF
50-59 years, male
116.2
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
115.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
115.2
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
113.7
GTEX-11PRG-2926-SM-5987A
50-59 years, male
113.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
110.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
108.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
107.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
106.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
106.1
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
105.4
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
105.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
105.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
102.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
99.3
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
99.3
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
97.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
97.3
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
95.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
93.9
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
93.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
92.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
89.9
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
87.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
86.6
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
85.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
85.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
75.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
71.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
70.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
67.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
67.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
63.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
62.3
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
58.4
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
57.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
53.6
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
51.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
48.6
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
47.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
46.0
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
45.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
44.1
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
43.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
35.8
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
34.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
30.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
20.5
Show all
Brain - Frontal Cortex (BA9) RPKM: 149.2
Samples: 108
Max RPKM: 585.8
Min RPKM: 10.6
Std RPKM: 100.9
Median RPKM: 127.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
585.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
415.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
413.2
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
326.6
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
322.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
303.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
300.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
296.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
294.1
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
287.3
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
284.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
282.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
274.7
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
274.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
266.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
265.0
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
261.5
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
259.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
257.2
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
252.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
249.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
233.8
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
223.6
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
222.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
217.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
214.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
210.2
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
208.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
206.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
203.7
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
201.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
199.4
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
188.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
185.7
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
184.2
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
181.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
179.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
179.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
178.2
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
172.8
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
172.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
161.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
157.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
157.0
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
154.2
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
148.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
145.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
141.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
140.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
139.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
139.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
138.7
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
137.8
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
128.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
126.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
124.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
118.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
118.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
114.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
113.9
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
112.1
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
111.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
109.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
103.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
99.9
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
98.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
96.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
94.7
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
92.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
91.0
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
90.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
86.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
85.6
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
84.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
82.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
82.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
81.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
81.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
76.2
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
73.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
67.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
67.2
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
65.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
65.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
63.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
61.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
60.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
59.6
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
58.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
55.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
54.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
52.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
52.2
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
45.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
41.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
40.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
38.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
36.9
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
36.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
31.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
31.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
27.3
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
26.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
25.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
25.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
18.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
15.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
10.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.