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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 351.1
Min RPKM: 22.9
Std RPKM: 65.2
Median RPKM: 141.3
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
351.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
336.6
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
325.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
308.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
300.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
265.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
263.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
252.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
248.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
247.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
244.0
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
239.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
232.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
227.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
226.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
219.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
219.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
210.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
208.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
206.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
205.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
199.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
196.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
196.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
196.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
195.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
195.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
195.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
192.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
191.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
187.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
187.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
184.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
182.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
180.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
180.1
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
178.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
178.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
169.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
169.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
168.8
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
166.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
166.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
162.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
160.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
159.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
159.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
159.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
157.8
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
156.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
156.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
156.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
151.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
150.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
148.1
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
146.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
144.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
142.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
141.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
137.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
137.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
136.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
133.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
131.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
131.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
130.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
130.5
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
128.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
128.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
127.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
127.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
126.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
125.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
119.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
119.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
118.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
118.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
117.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
114.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
110.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
109.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
109.3
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
108.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
108.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
108.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
104.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
103.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
102.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
100.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
99.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
99.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
93.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
93.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
92.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
91.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
90.1
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
89.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
86.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
86.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
85.1
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
84.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
83.8
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
82.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
78.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
78.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
74.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
73.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
71.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
69.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
66.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
66.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
63.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
54.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
52.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
32.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
32.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
22.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.