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XAB2
COLON - Expression summary
RNA expressioni
HPA:9.8TPM
GTEx:20.5RPKM
FANTOM5:28.9Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 9.8
overview Male, age 54 Sample 1
TPM: 12.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 8.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 13
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 8.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 7.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 20.5
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 22.1
Samples: 149

Max RPKM: 34.4
Min RPKM: 13.2
Std RPKM: 3.7
Median RPKM: 21.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 34.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 33.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 30.7
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 30.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 30.0
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 29.8
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 29.7
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 29.7
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 28.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 28.2
Show all
Colon - Transverse
RPKM: 19.2
Samples: 196

Max RPKM: 32.5
Min RPKM: 11.2
Std RPKM: 3.6
Median RPKM: 18.6
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 32.5
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 29.6
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 29.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 28.7
GTEX-Y114-1526-SM-4TT79 50-59 years, female 28.3
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 27.3
GTEX-S341-1426-SM-4AD6U 40-49 years, female 27.2
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 27.1
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 27.0
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 26.2
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 28.9
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 23.7
FF:10014-101C5 62,83,84 years, mixed 28.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.