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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 89
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 14.7
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 13.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 228.4
Min RPKM: 18.2
Std RPKM: 42.5
Median RPKM: 75.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
228.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
201.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
199.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
190.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
188.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
187.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
180.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
167.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
166.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
162.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
161.7
GTEX-QVJO-1826-SM-447C9
60-69 years, female
154.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
153.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
151.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
151.6
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
151.4
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
147.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
146.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
141.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
140.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
139.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
137.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
137.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
136.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
135.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
135.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
134.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
134.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
134.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
131.9
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
129.5
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
128.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
126.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
126.2
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
125.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
123.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
122.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
121.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
120.9
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
120.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
119.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
118.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
117.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
115.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
114.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
114.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
114.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
113.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
112.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
111.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
110.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
109.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
108.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
107.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
106.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
106.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
104.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
104.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
103.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
102.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
102.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
101.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
101.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
100.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
100.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
99.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
99.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
98.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
96.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
95.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
93.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
93.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
91.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
90.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
90.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
90.2
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
89.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
89.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
89.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
89.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
89.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
89.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
88.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
87.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
86.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
86.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
85.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
85.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
85.7
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
85.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
83.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
83.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
82.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
81.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
81.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
80.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
79.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
79.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
79.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
77.7
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
77.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
77.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
76.9
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
76.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
76.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
75.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
75.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
74.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
73.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
72.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
72.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
71.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
70.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
70.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
69.9
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
69.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
69.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
68.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
67.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
66.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
66.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
66.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
65.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
65.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
65.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
64.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
64.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
64.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
64.3
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
62.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
60.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
59.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
58.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
58.2
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
58.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
58.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
58.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
57.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
57.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
56.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
56.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
55.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
55.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
54.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
53.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
53.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
52.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
52.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
51.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
50.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
50.1
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
50.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
49.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
49.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
49.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
48.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
48.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
48.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
48.0
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
47.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
47.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
46.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
45.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
44.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
44.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
43.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
43.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
43.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
41.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
41.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
41.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
41.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
41.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
40.9
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
40.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
40.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
39.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
39.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
39.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
38.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
38.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
38.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
36.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
36.4
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
35.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
35.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
34.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
34.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
33.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
32.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
32.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
31.4
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
31.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
30.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
30.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
30.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
30.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
30.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
29.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
28.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
28.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
26.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
26.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
25.3
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
24.5
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
24.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
23.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
23.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
22.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
20.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
20.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
18.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
18.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
18.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.