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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 258.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 387.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 151
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 353.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 406.3
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 251.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 113.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 245.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 209.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 310.3
Min RPKM: 63.7
Std RPKM: 52.1
Median RPKM: 190.6
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
310.3
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
307.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
291.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
284.5
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
272.5
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
270.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
269.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
266.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
264.3
GTEX-QLQW-1026-SM-447A9
30-39 years, male
263.4
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
263.3
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
262.7
GTEX-Y111-2426-SM-4TT23
50-59 years, male
262.1
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
260.9
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
259.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
258.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
257.4
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
252.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
251.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
249.8
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
249.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
249.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
247.0
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
247.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
246.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
246.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
246.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
245.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
244.9
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
243.3
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
242.2
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
242.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
241.8
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
237.6
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
237.4
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
237.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
234.1
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
230.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
229.1
GTEX-11DXZ-2126-SM-59881
50-59 years, male
228.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
228.4
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
227.7
GTEX-117XS-2026-SM-5GID1
60-69 years, male
227.6
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
225.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
225.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
225.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
224.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
222.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
222.7
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
219.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
219.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
218.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
218.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
216.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
215.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
214.8
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
213.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
210.6
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
210.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
209.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
208.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
208.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
207.6
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
207.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
207.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
206.7
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
206.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
206.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
204.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
202.9
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
202.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
201.9
GTEX-12696-0226-SM-5EGL3
60-69 years, male
199.5
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
198.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
197.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
197.1
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
196.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
195.8
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
195.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
195.3
GTEX-13111-1526-SM-5EGJX
50-59 years, male
194.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
194.6
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
194.0
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
193.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
192.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
190.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
190.5
GTEX-S33H-0126-SM-4AD62
30-39 years, male
190.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
190.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
189.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
188.7
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
188.6
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
188.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
187.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
185.7
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
184.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
184.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
184.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
183.6
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
183.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
182.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
181.3
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
180.9
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
180.9
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
178.7
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
176.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
176.2
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
176.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
175.6
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
175.4
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
175.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
174.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
169.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
169.8
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
168.8
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
168.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
165.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
162.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
161.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
161.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
161.8
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
159.9
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
158.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
156.6
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
156.2
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
153.5
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
152.3
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
150.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
150.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
149.9
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
149.1
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
148.2
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
147.7
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
145.8
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
145.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
145.4
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
140.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
138.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
135.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
134.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
134.5
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
134.4
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
133.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
131.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
129.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
129.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
129.0
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
127.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
127.4
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
123.5
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
123.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
120.1
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
119.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
119.3
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
118.0
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
115.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
112.0
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
109.4
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
107.9
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
107.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
106.5
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
102.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
102.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
101.8
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
96.4
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
89.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
85.3
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
83.6
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
75.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
70.9
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
70.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
63.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.